Parental gene: | TNFAIP1, ENSMODG00000019235 |
| Aliases: | None |
| Description: | tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:HGNC Symbol;Acc:11894] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 2:506123103..506131290(+) |
>ENSMODG00000019235
CTGCAACGGGAGATGTCCGGAGACACCTGCTTGGCTGGCCTGTGTCCAGCCTCAGGGTCTAAGCCCAAACCAGGAGGCTT
CAAGGGCGGTGGGCTGGGCAACAAATACATCCAGCTCAATGTTGGGGGCTCCCTTTACTATACCACGGTTCGCGTGCTCA
CCCGCCATGACACCATGCTCAAAGCCATGTTCAGTGGGCGCATGGAGGTGCTCACTGACAAGGAGGGCTGGATCCTCATA
GACCGATGTGGGAAGCACTTTGGCACCATTTTGAATTACCTCCGAGATGACACCATCACCCTTCCCCAGAACCGGCAAGA
AATCAAGGAGCTTATGGCAGAAGCCAAATATTACCTCATCCAGGGGCTGGTGGACATGTGTCAGGCAGCACTGCAGGATA
AGAAGGACTCATATCAGCCCGTGTGCAACATCCCCATCATCACATCCCCAAAGGAGGAGGAGCGACTTATTGAAGCCTCT
ACTAAGCCTGTGGTGAAGCTACTTTACAACCGAAGCAACAACAAGTACTCCTACACCAGCAATTCTGATGACCACTTGCT
TAAGAACATTGAACTGTTTGACAAACTCTCTCTCCGCTTCAATGGCCGTGTGCTCTTTATTAAGGATGTCATTGGAGATG
AAATCTGCTGCTGGTCTTTCTATGGCCAAGGCCGGAAGTTGGCTGAGGTGTGCTGCACCTCCATTGTCTATGCCACTGAG
AAAAAGCAGACAAAGGTGGAGTTCCCAGAGGCTCGAATCTATGAGGAAACACTCAATGTCCTGCTCTACGAGACACCCCG
AGTCCCTGACAACTCTTTGTTGGAGGCAACAAGCCGCAGCCGGAGCCAGGTGTGCCCTGGTGAAGATGAGGAGGCCTTTG
AACTACGGGACCGAGTCCGCCGCATCCACGTCAAACGCTACAGCACCTATGACGATCGGCAGCTCAGCCACCAGTCTACC
CATCGGGATTGA
CTGCAACGGGAGATGTCCGGAGACACCTGCTTGGCTGGCCTGTGTCCAGCCTCAGGGTCTAAGCCCAAACCAGGAGGCTT
CAAGGGCGGTGGGCTGGGCAACAAATACATCCAGCTCAATGTTGGGGGCTCCCTTTACTATACCACGGTTCGCGTGCTCA
CCCGCCATGACACCATGCTCAAAGCCATGTTCAGTGGGCGCATGGAGGTGCTCACTGACAAGGAGGGCTGGATCCTCATA
GACCGATGTGGGAAGCACTTTGGCACCATTTTGAATTACCTCCGAGATGACACCATCACCCTTCCCCAGAACCGGCAAGA
AATCAAGGAGCTTATGGCAGAAGCCAAATATTACCTCATCCAGGGGCTGGTGGACATGTGTCAGGCAGCACTGCAGGATA
AGAAGGACTCATATCAGCCCGTGTGCAACATCCCCATCATCACATCCCCAAAGGAGGAGGAGCGACTTATTGAAGCCTCT
ACTAAGCCTGTGGTGAAGCTACTTTACAACCGAAGCAACAACAAGTACTCCTACACCAGCAATTCTGATGACCACTTGCT
TAAGAACATTGAACTGTTTGACAAACTCTCTCTCCGCTTCAATGGCCGTGTGCTCTTTATTAAGGATGTCATTGGAGATG
AAATCTGCTGCTGGTCTTTCTATGGCCAAGGCCGGAAGTTGGCTGAGGTGTGCTGCACCTCCATTGTCTATGCCACTGAG
AAAAAGCAGACAAAGGTGGAGTTCCCAGAGGCTCGAATCTATGAGGAAACACTCAATGTCCTGCTCTACGAGACACCCCG
AGTCCCTGACAACTCTTTGTTGGAGGCAACAAGCCGCAGCCGGAGCCAGGTGTGCCCTGGTGAAGATGAGGAGGCCTTTG
AACTACGGGACCGAGTCCGCCGCATCCACGTCAAACGCTACAGCACCTATGACGATCGGCAGCTCAGCCACCAGTCTACC
CATCGGGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000010870 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015721 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000017615 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000008912 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1565 | 88.58 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000019235 retrocopies