Parental gene: | Calcoco2, ENSMUSG00000006056 |
| Aliases: | Calcoco2, 2410154J16Rik, C77254, Ndp52, Ndp52l1 |
| Description: | calcium binding and coiled-coil domain 2 [Source:MGI Symbol;Acc:MGI:1343177] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:96099325..96111964(-) |
>ENSMUSG00000006056
ATGGACCAGTGCCCCATACCTACCTTGCTGGAACATGGCAACTTCTCTCAGGTCCTGTTTAACAATGTGGAGAAGTTCTA
TGCTCCTAGAGGAGATATCATGTGCTATTACACCCTCACTGAAAAGTTCATCCCTCGACGCAAGGACTGGATTGGCATCT
TTAAAGTAGGGTGGAAGACCACTCAGGAGTATTATACCTTCATGTGGGCTCCCTTGCCAAAAGACCAAAACAAGGATTCA
GCCACACAGCAGGAAATCCAATTCAAAGCTTATTACCTTCCCAAGGATGTGGAGCGCTACCAGTTCTGCTATGTGGATGA
AGATGGTTTAGTCCGGGGAACAAGTGTCCCTTTCCAGTTTTGTCCAGACCCTGACGAGGACATAATGGTTGTTATCAATA
AGGAAAAGGTAGAAGAGATGGAACAGCTCAGTGAGGAGCTTTACCAACAAAACCAGGAGCTGAAAGACAAGTACGCTGAC
CTCCATGAGCAGCTACAGAGGAAGCAGGTGGCACTGGAAGCAACACAGAGGGTCAATAAGACCTTAGAACACAAAGTGGA
AGAGAAGGCCTCCTGGGAGAAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGG
AGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCC
TGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGC
CTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGAAAGAGA
AGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGAAAGAGAAGGCCCCCTGGGAGGTAGAGAAGGCCCCCTGGAAGGAA
GTGAAGGCCTATTGGTGGAATGATCTGCACCGGTGA
ATGGACCAGTGCCCCATACCTACCTTGCTGGAACATGGCAACTTCTCTCAGGTCCTGTTTAACAATGTGGAGAAGTTCTA
TGCTCCTAGAGGAGATATCATGTGCTATTACACCCTCACTGAAAAGTTCATCCCTCGACGCAAGGACTGGATTGGCATCT
TTAAAGTAGGGTGGAAGACCACTCAGGAGTATTATACCTTCATGTGGGCTCCCTTGCCAAAAGACCAAAACAAGGATTCA
GCCACACAGCAGGAAATCCAATTCAAAGCTTATTACCTTCCCAAGGATGTGGAGCGCTACCAGTTCTGCTATGTGGATGA
AGATGGTTTAGTCCGGGGAACAAGTGTCCCTTTCCAGTTTTGTCCAGACCCTGACGAGGACATAATGGTTGTTATCAATA
AGGAAAAGGTAGAAGAGATGGAACAGCTCAGTGAGGAGCTTTACCAACAAAACCAGGAGCTGAAAGACAAGTACGCTGAC
CTCCATGAGCAGCTACAGAGGAAGCAGGTGGCACTGGAAGCAACACAGAGGGTCAATAAGACCTTAGAACACAAAGTGGA
AGAGAAGGCCTCCTGGGAGAAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGG
AGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCC
TGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGC
CTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGAAAGAGA
AGGCCTCCTGGGAGGAAGAGAAGGCCTCCTGGGAGAAAGAGAAGGCCCCCTGGGAGGTAGAGAAGGCCCCCTGGAAGGAA
GTGAAGGCCTATTGGTGGAATGATCTGCACCGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .02 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000011709 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000031074 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013395 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1016 | 78.19 | 60.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1108 | 79.14 | 55.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2097 | 91.94 | 59.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000006056 retrocopies