Parental gene: | Tnpo1, ENSMUSG00000009470 |
| Aliases: | Tnpo1, AU021749, D13Ertd688e, IPO2, Kpnb2, MIP, MIP1, TRN |
| Description: | transportin 1 [Source:MGI Symbol;Acc:MGI:2681523] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 13:98839018..98926384(-) |
>ENSMUSG00000009470
ATGGTGTGGGACCGGCAAACCAAGATGGAGTATGAGTGGAAACCTGACGAGCAAGGGCTTCAGCAGATCCTGCAGCTGCT
CAAGGAGTCCCAGTCCCCAGACACCACCATCCAGAGGACCGTGCAACAAAAACTGGAACAACTCAATCAATATCCAGATT
TTAACAACTACTTGATTTTTGTTCTTACAAAATTAAAATCTGAAGATGAGCCCACACGGTCATTGAGCGGTCTGATCTTG
AAGAACAATGTGAAAGCTCATTTTCAGAACTTCCCAAATGGTGTGACAGACTTCATCAAGAGTGAATGTCTAAATAACAT
TGGGGACTCCTCTCCGTTGATCAGAGCCACTGTCGGTATTTTAATTACAACCATAGCCTCCAAGGGAGAGCTGCAGAATT
GGCCTGATCTCTTACCAAAACTCTGTAGCCTGCTGGATTCCGAAGACTACAACACTTGTGAGGGAGCCTTCGGTGCCCTT
CAGAAGATATGTGAGGACTCTGCAGAGATTTTAGACAGTGATGTCTTAGATCGCCCTCTCAACATCATGATCCCCAAGTT
TTTACAGTTTTTCAAGCACAGCAGTCCCAAAATAAGGTCTCATGCTGTTGCATGTGTCAATCAGTTCATCATCAGTCGGA
CCCAGGCGCTCATGCTGCACATCGATTCCTTCATTGAGAACCTCTTTGCACTGGCTGGCGACGAGGAAGCAGAGGTGCGG
AAGAACGTGTGCCGGGCGCTTGTGATGTTGCTTGAAGTCCGGATGGATCGCCTGCTTCCTCATATGCACAACATAGTCGA
GTACATGCTGCAGAGAACCCAAGACCAAGATGAGAATGTAGCTCTGGAGGCCTGTGAATTCTGGCTGACTTTGGCTGAAC
AGCCAATATGCAAAGATGTACTTGTAAGGCATCTACCAAAGTTGATTCCTGTGTTAGTGAATGGCATGAAGTACTCAGAT
ATAGATATTATCCTGCTTAAGGGTGATGTTGAGGAAGATGAGACCATCCCGGATAGTGAGCAGGATATACGGCCGCGGTT
TCATCGCTCGAGGACAGTGGCTCAGCAGCATGAGGAGGATGGGATTGAGGAGGAAGACGATGATGATGACGAAATTGATG
ATGATGACACGATTTCTGACTGGAACCTGAGAAAGTGTTCTGCTGCTGCTCTCGATGTTCTCGCAAATGTTTATCGTGAT
GAGCTTTTGCCGCACATTCTGCCACTTTTGAAAGAATTGCTTTTCCATCATGAATGGGTTGTGAAAGAATCTGGCATCTT
GGTTTTAGGAGCAATTGCTGAAGGTTGTATGCAAGGCATGATTCCGTACCTGCCCGAGCTCATTCCTCACCTTATTCAGT
GCCTTTCTGATAAAAAGGCTCTTGTGCGTTCCATCACCTGCTGGACTCTTAGCCGCTATGCACACTGGGTAGTCAGCCAG
CCACCAGATACGTACCTGAAGCCATTAATGACAGAACTGCTGAAGCGTATCCTCGATAGCAACAAGAGAGTACAGGAAGC
AGCTTGCAGTGCCTTCGCTACATTAGAAGAGGAGGCTTGTACAGAGCTCGTCCCTTACCTTGCTTATATACTCGATACCC
TCGTCTTCGCCTTCAGTAAATACCAGCATAAGAACCTGCTCATTCTGTACGACGCCATAGGGACACTGGCAGATTCAGTG
GGACATCATTTAAACAAGCCAGAATATATTCAGATGCTAATGCCTCCTTTGATCCAGAAATGGAACATGCTGAAGGATGA
AGACAAGGATCTTTTCCCTTTGCTTGAGTGTCTCTCGTCTGTTGCCACAGCCTTGCAGTCTGGCTTCCTTCCATATTGTG
AACCTGTATATCAGCGTTGCGTAAACCTAGTTCAGAAGACTCTGGCACAAGCCATGCTAAACAATGCTCAACCAGAACAG
TATGAAGCTCCAGATAAAGATTTTATGATTGTGGCTCTTGACTTACTCAGCGGCCTGGCTGAGGGCCTGGGAGGCAACAT
TGAGCAGCTGGTGGCCCGCAGTAACATCCTGACGCTGATGTACCAGTGCATGCAGGATAAAATGCCCGAGGTTCGGCAGA
GTTCTTTTGCATTGCTAGGTGACCTGACTAAAGCGTGCTTCCAGCATGTTAAGCCTTGTATAGCTGATTTCATGCCAATA
TTGGGAACCAATCTAAATCCAGAGTTTATTTCAGTCTGCAACAATGCCACCTGGGCGATTGGGGAAATATCAATCCAAAT
GGGTATAGAGATGCAGCCCTACATCCCTATGGTGTTGCACCAGCTTGTGGAGATCATTAACAGACCCAACACCCCAAAGA
CGCTGTTGGAGAACACAGCAATAACAATTGGTCGTCTTGGTTACGTTTGTCCTCAAGAGGTGGCCCCCATGCTACAGCAG
TTTATAAGACCCTGGTGTACCTCTCTGAGAAACATAAGAGACAATGAAGAAAAAGATTCAGCATTCCGTGGGATTTGTAC
CATGATCAGTGTGAATCCCAGTGGCGTAATCCAAGATTTTATATTTTTTTGTGATGCTGTTGCATCATGGATTAACCCAA
AAGATGATCTCAGAGACATGTTCTGTAAGATCCTTCATGGATTTAAAAACCAAGTTGGGGATGAAAATTGGAGGCGATTC
TCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTTGCAGCTTTTTATGGTGTTTAA
ATGGTGTGGGACCGGCAAACCAAGATGGAGTATGAGTGGAAACCTGACGAGCAAGGGCTTCAGCAGATCCTGCAGCTGCT
CAAGGAGTCCCAGTCCCCAGACACCACCATCCAGAGGACCGTGCAACAAAAACTGGAACAACTCAATCAATATCCAGATT
TTAACAACTACTTGATTTTTGTTCTTACAAAATTAAAATCTGAAGATGAGCCCACACGGTCATTGAGCGGTCTGATCTTG
AAGAACAATGTGAAAGCTCATTTTCAGAACTTCCCAAATGGTGTGACAGACTTCATCAAGAGTGAATGTCTAAATAACAT
TGGGGACTCCTCTCCGTTGATCAGAGCCACTGTCGGTATTTTAATTACAACCATAGCCTCCAAGGGAGAGCTGCAGAATT
GGCCTGATCTCTTACCAAAACTCTGTAGCCTGCTGGATTCCGAAGACTACAACACTTGTGAGGGAGCCTTCGGTGCCCTT
CAGAAGATATGTGAGGACTCTGCAGAGATTTTAGACAGTGATGTCTTAGATCGCCCTCTCAACATCATGATCCCCAAGTT
TTTACAGTTTTTCAAGCACAGCAGTCCCAAAATAAGGTCTCATGCTGTTGCATGTGTCAATCAGTTCATCATCAGTCGGA
CCCAGGCGCTCATGCTGCACATCGATTCCTTCATTGAGAACCTCTTTGCACTGGCTGGCGACGAGGAAGCAGAGGTGCGG
AAGAACGTGTGCCGGGCGCTTGTGATGTTGCTTGAAGTCCGGATGGATCGCCTGCTTCCTCATATGCACAACATAGTCGA
GTACATGCTGCAGAGAACCCAAGACCAAGATGAGAATGTAGCTCTGGAGGCCTGTGAATTCTGGCTGACTTTGGCTGAAC
AGCCAATATGCAAAGATGTACTTGTAAGGCATCTACCAAAGTTGATTCCTGTGTTAGTGAATGGCATGAAGTACTCAGAT
ATAGATATTATCCTGCTTAAGGGTGATGTTGAGGAAGATGAGACCATCCCGGATAGTGAGCAGGATATACGGCCGCGGTT
TCATCGCTCGAGGACAGTGGCTCAGCAGCATGAGGAGGATGGGATTGAGGAGGAAGACGATGATGATGACGAAATTGATG
ATGATGACACGATTTCTGACTGGAACCTGAGAAAGTGTTCTGCTGCTGCTCTCGATGTTCTCGCAAATGTTTATCGTGAT
GAGCTTTTGCCGCACATTCTGCCACTTTTGAAAGAATTGCTTTTCCATCATGAATGGGTTGTGAAAGAATCTGGCATCTT
GGTTTTAGGAGCAATTGCTGAAGGTTGTATGCAAGGCATGATTCCGTACCTGCCCGAGCTCATTCCTCACCTTATTCAGT
GCCTTTCTGATAAAAAGGCTCTTGTGCGTTCCATCACCTGCTGGACTCTTAGCCGCTATGCACACTGGGTAGTCAGCCAG
CCACCAGATACGTACCTGAAGCCATTAATGACAGAACTGCTGAAGCGTATCCTCGATAGCAACAAGAGAGTACAGGAAGC
AGCTTGCAGTGCCTTCGCTACATTAGAAGAGGAGGCTTGTACAGAGCTCGTCCCTTACCTTGCTTATATACTCGATACCC
TCGTCTTCGCCTTCAGTAAATACCAGCATAAGAACCTGCTCATTCTGTACGACGCCATAGGGACACTGGCAGATTCAGTG
GGACATCATTTAAACAAGCCAGAATATATTCAGATGCTAATGCCTCCTTTGATCCAGAAATGGAACATGCTGAAGGATGA
AGACAAGGATCTTTTCCCTTTGCTTGAGTGTCTCTCGTCTGTTGCCACAGCCTTGCAGTCTGGCTTCCTTCCATATTGTG
AACCTGTATATCAGCGTTGCGTAAACCTAGTTCAGAAGACTCTGGCACAAGCCATGCTAAACAATGCTCAACCAGAACAG
TATGAAGCTCCAGATAAAGATTTTATGATTGTGGCTCTTGACTTACTCAGCGGCCTGGCTGAGGGCCTGGGAGGCAACAT
TGAGCAGCTGGTGGCCCGCAGTAACATCCTGACGCTGATGTACCAGTGCATGCAGGATAAAATGCCCGAGGTTCGGCAGA
GTTCTTTTGCATTGCTAGGTGACCTGACTAAAGCGTGCTTCCAGCATGTTAAGCCTTGTATAGCTGATTTCATGCCAATA
TTGGGAACCAATCTAAATCCAGAGTTTATTTCAGTCTGCAACAATGCCACCTGGGCGATTGGGGAAATATCAATCCAAAT
GGGTATAGAGATGCAGCCCTACATCCCTATGGTGTTGCACCAGCTTGTGGAGATCATTAACAGACCCAACACCCCAAAGA
CGCTGTTGGAGAACACAGCAATAACAATTGGTCGTCTTGGTTACGTTTGTCCTCAAGAGGTGGCCCCCATGCTACAGCAG
TTTATAAGACCCTGGTGTACCTCTCTGAGAAACATAAGAGACAATGAAGAAAAAGATTCAGCATTCCGTGGGATTTGTAC
CATGATCAGTGTGAATCCCAGTGGCGTAATCCAAGATTTTATATTTTTTTGTGATGCTGTTGCATCATGGATTAACCCAA
AAGATGATCTCAGAGACATGTTCTGTAAGATCCTTCATGGATTTAAAAACCAAGTTGGGGATGAAAATTGGAGGCGATTC
TCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTTGCAGCTTTTTATGGTGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 79 .34 RPM |
| SRP007412_cerebellum | 86 .19 RPM |
| SRP007412_heart | 74 .49 RPM |
| SRP007412_kidney | 144 .80 RPM |
| SRP007412_liver | 82 .47 RPM |
| SRP007412_testis | 100 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000083312 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000015545 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016972 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000209 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1501 | 96.38 | 89.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000009470 retrocopies