Parental gene: | Rnf170, ENSMUSG00000013878 |
| Aliases: | Rnf170, 6720407G21Rik, AI481227 |
| Description: | ring finger protein 170 [Source:MGI Symbol;Acc:MGI:1924983] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 8:26119367..26143871(+) |
>ENSMUSG00000013878
ATGCAAAGATATTGGCGTTTCCAAGACAACAAGATACAAGATATATGCTTTGGAGTCCTAGGAGAATCTTGGATTCAAAG
ACCTGTAATGGCCAGGTACTACAGTGAAGGTCAGAGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTGAGCGACCAAG
TCCTTGTGGCTGTGGTGGTCAGCTTGGCGTTGACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTACAGCAGAACATC
CATCCAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAACAATTCCAAACAGAACAGGATGTCCCTGCTCCTGCCCGACA
GCAGTTCTACACTGAAATGTACTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCT
TTTGTGGTTCCTGCATAATTGCATACTGGCGATACGGGTCCTGGCTTGGTGCAATCAGTTGTCCTATCTGTAGACAAACG
GTAACTCTCCTCCTAACAGTATTTGGTGAAGATGATCAATCTCAGGATGTTATAAGATTGCGTCAAGATGTTAATGATTA
TAACCGGAGATTCTCAGGGCAGCCTAGATCTATTATGGAAAGGATCATGGACCTCCCCACCTTGCTGAGACATGCGTTCA
GGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCTTTGTTTGATGGGAGCTTTTTTCTAT
TTAATATCACCTCTAGATTTTGTACCTGAAGCCTTGTTTGGAATTCTGGGCTTTCTAGATGATTTCTTTGTTATCTTTTT
GTTGCTTATTTACATCTCCATTATGTATCGAGAAGTGATAACCCAAAGACTAACTAGGTGA
ATGCAAAGATATTGGCGTTTCCAAGACAACAAGATACAAGATATATGCTTTGGAGTCCTAGGAGAATCTTGGATTCAAAG
ACCTGTAATGGCCAGGTACTACAGTGAAGGTCAGAGTTTGCAGCAGGATGACTCATTTATAGAAGGAGTGAGCGACCAAG
TCCTTGTGGCTGTGGTGGTCAGCTTGGCGTTGACCGCTACTCTCCTGTATGCACTTCTCAGAAATGTACAGCAGAACATC
CATCCAGAAAACCAGGAGCTAGTCAGAGTGCTTCGAGAACAATTCCAAACAGAACAGGATGTCCCTGCTCCTGCCCGACA
GCAGTTCTACACTGAAATGTACTGTCCAATCTGCTTACATCAAGCCTCCTTTCCTGTTGAAACAAACTGTGGACATCTCT
TTTGTGGTTCCTGCATAATTGCATACTGGCGATACGGGTCCTGGCTTGGTGCAATCAGTTGTCCTATCTGTAGACAAACG
GTAACTCTCCTCCTAACAGTATTTGGTGAAGATGATCAATCTCAGGATGTTATAAGATTGCGTCAAGATGTTAATGATTA
TAACCGGAGATTCTCAGGGCAGCCTAGATCTATTATGGAAAGGATCATGGACCTCCCCACCTTGCTGAGACATGCGTTCA
GGGAAGTGTTCTCAGTTGGGGGCCTCTTCTGGATGTTCCGCATTAGGATAATGCTTTGTTTGATGGGAGCTTTTTTCTAT
TTAATATCACCTCTAGATTTTGTACCTGAAGCCTTGTTTGGAATTCTGGGCTTTCTAGATGATTTCTTTGTTATCTTTTT
GTTGCTTATTTACATCTCCATTATGTATCGAGAAGTGATAACCCAAAGACTAACTAGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 15 .98 RPM |
| SRP007412_cerebellum | 13 .42 RPM |
| SRP007412_heart | 8 .06 RPM |
| SRP007412_kidney | 8 .07 RPM |
| SRP007412_liver | 10 .13 RPM |
| SRP007412_testis | 5 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000001127 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010090 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007925 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000013497 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000006471 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000018446 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2907 | 99.30 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000013878 retrocopies