Parental gene: | Lcp1, ENSMUSG00000021998 |
| Aliases: | Lcp1, AW536232, D14Ertd310e, LCP-1, Pls2, pp65 |
| Description: | lymphocyte cytosolic protein 1 [Source:MGI Symbol;Acc:MGI:104808] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 14:75131100..75230842(+) |
>ENSMUSG00000021998
ATGGCCAGAGGATCCGTGTCTGACGAAGAAATGATGGAGCTCAGAGAGGCTTTTGCCAAAGTTGATACCGATGGCAACGG
ATACATCAGCTGCAATGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGCCTCTGCCTGGGTACCGAGTGAGAGAAATCA
CAGAAAACCTGATGGCCACAGGTGATCTGGACCAAGATGGAAAGATCAGCTTTGATGAGTTTATCAAGGTCTTCCATGGC
TTAAAAAGCACCGAGGTTGCCAAAACCTTCCGAAAAGCTATCAACAAGAAGGAAGGGATCTGTGCGATTGGCGGCACCTC
TGAGCAGTCCAGCGTTGGTACCCAGCACTCTTACTCAGAGGAAGAAAAGTATGCCTTTGTCAACTGGATAAACAAAGCCC
TGGAGAATGACCCCGACTGCCGGCATGTCATCCCCATGAACCCCAACACCGACGATCTCTTCAATGCTGTAGGCGATGGC
ATAGTTCTTTGTAAAATGATCAACCTGTCTGTGCCAGACACGATTGACGAGAGAACGATCAACAAGAAAAAGCTCACACC
ATTCACCATTCAGGAAAACTTGAACTTGGCTCTGAACTCTGCCTCTGCCATTGGGTGCCACGTGGTTAATATAGGGGCCG
AGGACCTGAAGGAGGGCAAGCCTTACCTGGTCCTGGGACTTTTGTGGCAAGTCATCAAGATTGGGTTGTTTGCTGACATT
GAACTCAGCAGAAATGAAGCTCTGATTGCTCTTTTGAGAGAAGGAGAGAGCCTAGAGGATTTGATGAAGTTGTCTCCTGA
AGAACTCCTGCTGCGGTGGGCTAACTACCACCTAGAAAACGCAGGCTGCACCAAAATCACCAACTTCAGCACCGACATCA
AGGACTCCAAAGCTTATTACCACCTGCTCGAGCAAGTGGCTCCAAAAGGAGATGAAGAAGGGATCCCGGCGGTTGTGATT
GACATGTCAGGACTGAGGGAGAAGGATGACATCCAGAGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCTGGGCTGCCG
GCAGTTTGTCACAGCTACTGATGTTGTCCGAGGGAACCCCAAGTTGAACCTGGCCTTCATTGCCAACCTCTTCAACAAAT
ACCCTGCCTTACACAAACCAGAGAACCAGGACATTGACTGGGGGGCTCTCGAAGGTGAGACGAGGGAAGAGCGGACCTTC
AGGAATTGGATGAACTCCCTGGGCGTTAACCCGCGCGTCAATCACTTGTACAGCGACTTATCGGATGCCTTAGTCATCTT
CCAGCTCTATGAGAAGATCAAAGTCCCTGTTGATTGGAACAGAGTAAACAAGCCTCCATACCCCAAGCTGGGGGGCAATA
TGAAAAAGCTGGAGAACTGTAATTATGCAGTGGACCTGGGGAAGAATCAAGCTAAATTCTCCCTGGTTGGCATCGCAGGA
CAAGACCTCAATGAAGGAAACCGAACTCTCACGCTGGCATTGGTTTGGCAGCTCATGAGAAGGTACACACTGAATATCCT
GGAAGATATCGGAGGTGGACAGAAGGTCAATGATGACATTATTGTCAACTGGGTGAATACGACCTTGAAGGAGGCACAGA
AAAGCTCATCCATTGCTAGCTTCAAGGACCCAAAGATCAGTACCAGCCTCCCGGTTCTGGATCTCATTGACGCCATTCAG
CCAGGTTCCATAAACTATGACCTTCTAAAGACAGAAAACCTGGATGATGAAGAGAAACTCAACAATGCAAAGTATGCCAT
CTCTATGGCCAGAAAAATCGGAGCAAGGGTGTACGCCCTCCCAGAAGACCTGGTTGAAGTGAACCCCAAAATGGTCATGA
CAGTGTTTGCCTGCCTCATGGGGAAAGGGATGAAGAGGGTGTAA
ATGGCCAGAGGATCCGTGTCTGACGAAGAAATGATGGAGCTCAGAGAGGCTTTTGCCAAAGTTGATACCGATGGCAACGG
ATACATCAGCTGCAATGAGCTAAATGACTTGTTCAAGGCCGCCTGCCTGCCTCTGCCTGGGTACCGAGTGAGAGAAATCA
CAGAAAACCTGATGGCCACAGGTGATCTGGACCAAGATGGAAAGATCAGCTTTGATGAGTTTATCAAGGTCTTCCATGGC
TTAAAAAGCACCGAGGTTGCCAAAACCTTCCGAAAAGCTATCAACAAGAAGGAAGGGATCTGTGCGATTGGCGGCACCTC
TGAGCAGTCCAGCGTTGGTACCCAGCACTCTTACTCAGAGGAAGAAAAGTATGCCTTTGTCAACTGGATAAACAAAGCCC
TGGAGAATGACCCCGACTGCCGGCATGTCATCCCCATGAACCCCAACACCGACGATCTCTTCAATGCTGTAGGCGATGGC
ATAGTTCTTTGTAAAATGATCAACCTGTCTGTGCCAGACACGATTGACGAGAGAACGATCAACAAGAAAAAGCTCACACC
ATTCACCATTCAGGAAAACTTGAACTTGGCTCTGAACTCTGCCTCTGCCATTGGGTGCCACGTGGTTAATATAGGGGCCG
AGGACCTGAAGGAGGGCAAGCCTTACCTGGTCCTGGGACTTTTGTGGCAAGTCATCAAGATTGGGTTGTTTGCTGACATT
GAACTCAGCAGAAATGAAGCTCTGATTGCTCTTTTGAGAGAAGGAGAGAGCCTAGAGGATTTGATGAAGTTGTCTCCTGA
AGAACTCCTGCTGCGGTGGGCTAACTACCACCTAGAAAACGCAGGCTGCACCAAAATCACCAACTTCAGCACCGACATCA
AGGACTCCAAAGCTTATTACCACCTGCTCGAGCAAGTGGCTCCAAAAGGAGATGAAGAAGGGATCCCGGCGGTTGTGATT
GACATGTCAGGACTGAGGGAGAAGGATGACATCCAGAGGGCAGAGTGCATGCTGCAACAGGCGGAGAGGCTGGGCTGCCG
GCAGTTTGTCACAGCTACTGATGTTGTCCGAGGGAACCCCAAGTTGAACCTGGCCTTCATTGCCAACCTCTTCAACAAAT
ACCCTGCCTTACACAAACCAGAGAACCAGGACATTGACTGGGGGGCTCTCGAAGGTGAGACGAGGGAAGAGCGGACCTTC
AGGAATTGGATGAACTCCCTGGGCGTTAACCCGCGCGTCAATCACTTGTACAGCGACTTATCGGATGCCTTAGTCATCTT
CCAGCTCTATGAGAAGATCAAAGTCCCTGTTGATTGGAACAGAGTAAACAAGCCTCCATACCCCAAGCTGGGGGGCAATA
TGAAAAAGCTGGAGAACTGTAATTATGCAGTGGACCTGGGGAAGAATCAAGCTAAATTCTCCCTGGTTGGCATCGCAGGA
CAAGACCTCAATGAAGGAAACCGAACTCTCACGCTGGCATTGGTTTGGCAGCTCATGAGAAGGTACACACTGAATATCCT
GGAAGATATCGGAGGTGGACAGAAGGTCAATGATGACATTATTGTCAACTGGGTGAATACGACCTTGAAGGAGGCACAGA
AAAGCTCATCCATTGCTAGCTTCAAGGACCCAAAGATCAGTACCAGCCTCCCGGTTCTGGATCTCATTGACGCCATTCAG
CCAGGTTCCATAAACTATGACCTTCTAAAGACAGAAAACCTGGATGATGAAGAGAAACTCAACAATGCAAAGTATGCCAT
CTCTATGGCCAGAAAAATCGGAGCAAGGGTGTACGCCCTCCCAGAAGACCTGGTTGAAGTGAACCCCAAAATGGTCATGA
CAGTGTTTGCCTGCCTCATGGGGAAAGGGATGAAGAGGGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 7 .85 RPM |
| SRP007412_cerebellum | 10 .64 RPM |
| SRP007412_heart | 26 .31 RPM |
| SRP007412_kidney | 49 .03 RPM |
| SRP007412_liver | 88 .45 RPM |
| SRP007412_testis | 2 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012037 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1307 | 90.26 | 59.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3697 | 87.64 | 56.46 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000021998 retrocopies