Parental gene:

Taf8, ENSMUSG00000023980

Aliases:Taf8, AW260255, Tbn
Description:TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq [Source:MGI Symbol;Acc:MGI:1926879]
Organism:Mouse (Mus musculus)
Coordinates:17:47488049..47502287(-)


>ENSMUSG00000023980
ATGGCTGACACGGCGGCCGGGCCTGGTGGCTCCGGAACGAGACCGGGAAGTAAGCAATCCACTAACCCTGCTGATAACTA
CCATCTGGCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTCCTTGCTGACAGAGGCGGGATTTGAGAGTGCCGAGAAAG
CGTCTGTGGAGACACTGACAGAGATGCTGCAGAGCTACATCTCAGAAATCGGGAGAAGTGCTAAGTCATACTGTGAGCAC
ACAGCCAGGACCCAGCCCACACTGTCGGACATCGTGGTCACATTGGTTGAAATGGGCTTCAATGTTGACACTCTACCTGC
CTATGCAAAACGGTCTCAGAGGATGGTCATCACTGCACCTCCAGTGACCAATCAGCCAGTGACCCCCAAGGCCCTCACTG
CAGGGCAGAACCGGCCCCACCCGCCACACATCCCCAGCCATTTTCCTGAGTTTCCGGATCCCCACACCTACATCAAAACT
CCGACATACCGTGAGCCAGTGTCTGACTACCAGATCCTTCGGGAGAAGGCCGCATCTCAGAGACGAGACGTGGAGCGAGC
ACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCACTTTTCCTTTGATCGCTG
CCAGACCGTTCACCATCCCCTACCTCACGGCCTTGCTTCCTTCTGAGCTGGAGATACAGCAGATGGAAGAGACCGACTCC
TCGGAGCAGGAGGAGCAAACAGATACAGAGAACAACGCTCTTCATATCAGCACGGACGATTCCGGAGCTGAGAAGGAGAG
CGCTTCTGTTCTGCAGCAGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGGAGAGCGTCATCGATAACCCCTATCTGC
GGCCCGTGAAGAAGCCCAAGATCCGTAGGAAGAAGTCCCTCTCGTGA

Library Parental gene expression (RPM)
SRP007412_brain 13 .29 RPM
SRP007412_cerebellum 17 .33 RPM
SRP007412_heart 13 .01 RPM
SRP007412_kidney 17 .86 RPM
SRP007412_liver 10 .43 RPM
SRP007412_testis 7 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010516 ortholog_one2one 1 retrogene
retro_chof_661,
Macropus eugenii ENSMEUG00000006952 ortholog_one2one 1 retrogene
retro_meug_150,
Microcebus murinus ENSMICG00000011353 ortholog_one2one 6 retrogenes
retro_mmur_112, retro_mmur_1455, retro_mmur_443, retro_mmur_455, retro_mmur_554, retro_mmur_555,
Monodelphis domestica ENSMODG00000012785 ortholog_one2many 2 retrogenes
retro_mdom_1206, retro_mdom_1357,
Otolemur garnettii ENSOGAG00000016885 ortholog_one2one 1 retrogene
retro_ogar_759,
Rattus norvegicus ENSRNOG00000015249 ortholog_one2one 1 retrogene
retro_rnor_2317,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_436 79.44 57.79
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Download FASTA sequences of all ENSMUSG00000023980 retrocopies