Parental gene: | Taf8, ENSMUSG00000023980 |
| Aliases: | Taf8, AW260255, Tbn |
| Description: | TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq [Source:MGI Symbol;Acc:MGI:1926879] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 17:47488049..47502287(-) |
>ENSMUSG00000023980
ATGGCTGACACGGCGGCCGGGCCTGGTGGCTCCGGAACGAGACCGGGAAGTAAGCAATCCACTAACCCTGCTGATAACTA
CCATCTGGCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTCCTTGCTGACAGAGGCGGGATTTGAGAGTGCCGAGAAAG
CGTCTGTGGAGACACTGACAGAGATGCTGCAGAGCTACATCTCAGAAATCGGGAGAAGTGCTAAGTCATACTGTGAGCAC
ACAGCCAGGACCCAGCCCACACTGTCGGACATCGTGGTCACATTGGTTGAAATGGGCTTCAATGTTGACACTCTACCTGC
CTATGCAAAACGGTCTCAGAGGATGGTCATCACTGCACCTCCAGTGACCAATCAGCCAGTGACCCCCAAGGCCCTCACTG
CAGGGCAGAACCGGCCCCACCCGCCACACATCCCCAGCCATTTTCCTGAGTTTCCGGATCCCCACACCTACATCAAAACT
CCGACATACCGTGAGCCAGTGTCTGACTACCAGATCCTTCGGGAGAAGGCCGCATCTCAGAGACGAGACGTGGAGCGAGC
ACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCACTTTTCCTTTGATCGCTG
CCAGACCGTTCACCATCCCCTACCTCACGGCCTTGCTTCCTTCTGAGCTGGAGATACAGCAGATGGAAGAGACCGACTCC
TCGGAGCAGGAGGAGCAAACAGATACAGAGAACAACGCTCTTCATATCAGCACGGACGATTCCGGAGCTGAGAAGGAGAG
CGCTTCTGTTCTGCAGCAGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGGAGAGCGTCATCGATAACCCCTATCTGC
GGCCCGTGAAGAAGCCCAAGATCCGTAGGAAGAAGTCCCTCTCGTGA
ATGGCTGACACGGCGGCCGGGCCTGGTGGCTCCGGAACGAGACCGGGAAGTAAGCAATCCACTAACCCTGCTGATAACTA
CCATCTGGCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTCCTTGCTGACAGAGGCGGGATTTGAGAGTGCCGAGAAAG
CGTCTGTGGAGACACTGACAGAGATGCTGCAGAGCTACATCTCAGAAATCGGGAGAAGTGCTAAGTCATACTGTGAGCAC
ACAGCCAGGACCCAGCCCACACTGTCGGACATCGTGGTCACATTGGTTGAAATGGGCTTCAATGTTGACACTCTACCTGC
CTATGCAAAACGGTCTCAGAGGATGGTCATCACTGCACCTCCAGTGACCAATCAGCCAGTGACCCCCAAGGCCCTCACTG
CAGGGCAGAACCGGCCCCACCCGCCACACATCCCCAGCCATTTTCCTGAGTTTCCGGATCCCCACACCTACATCAAAACT
CCGACATACCGTGAGCCAGTGTCTGACTACCAGATCCTTCGGGAGAAGGCCGCATCTCAGAGACGAGACGTGGAGCGAGC
ACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTTTTCAAGGATGATGTCAGCACTTTTCCTTTGATCGCTG
CCAGACCGTTCACCATCCCCTACCTCACGGCCTTGCTTCCTTCTGAGCTGGAGATACAGCAGATGGAAGAGACCGACTCC
TCGGAGCAGGAGGAGCAAACAGATACAGAGAACAACGCTCTTCATATCAGCACGGACGATTCCGGAGCTGAGAAGGAGAG
CGCTTCTGTTCTGCAGCAGAGCTCCTCCTTGTCCGGCAGCCGGAATGGCGAGGAGAGCGTCATCGATAACCCCTATCTGC
GGCCCGTGAAGAAGCCCAAGATCCGTAGGAAGAAGTCCCTCTCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 13 .29 RPM |
| SRP007412_cerebellum | 17 .33 RPM |
| SRP007412_heart | 13 .01 RPM |
| SRP007412_kidney | 17 .86 RPM |
| SRP007412_liver | 10 .43 RPM |
| SRP007412_testis | 7 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010516 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006952 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011353 | ortholog_one2one | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000012785 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016885 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000015249 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_436 | 79.44 | 57.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000023980 retrocopies