Parental gene: | Ctdsp1, ENSMUSG00000026176 |
| Aliases: | Ctdsp1, GIP, NLIIF, Nif3, SCP1 |
| Description: | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:MGI Symbol;Acc:MGI:2654470] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 1:74391508..74397285(+) |
>ENSMUSG00000026176
ATGGACAGCTCGGCCGTCATTACTCAGATCAGCAAGGAGGAGGCGCGGGGCCCGCTGCGGGGCAAAGGTGACCAGAAGTC
AGCAGTTTCCCAGAAGCCCCGGAGTCGGGGCATCCTCCACTCCCTCTTCTGCTGTGTCTGCCGGGATGATGGGGAGCCCC
TACCTGCCCACAGTGGGGCTCCCCTGCTGGTGGAGGAAAATGGCGCCATCCCTAAGCACACCCCAGTCCAGTACCTGCTT
CCCGAGGCCAAGGCCCAGGACTCAGACAAGATCTGCGTCGTCATCGACCTGGACGAGACCCTGGTGCACAGCTCCTTCAA
GCCAGTGAACAATGCGGACTTCATCATCCCGGTGGAGATAGATGGAGTGGTCCACCAGGTCTATGTGCTGAAGCGGCCCC
ACGTAGATGAGTTCCTACAGCGAATGGGCGAGCTCTTTGAATGTGTGCTGTTCACTGCCAGCCTTGCCAAGTACGCAGAC
CCTGTAGCTGATCTGCTGGACAAGTGGGGAGCCTTCCGTGCCAGGCTGTTTCGAGAGTCGTGTGTCTTCCACCGGGGGAA
CTACGTAAAGGACCTGAGCAGGCTGGGCCGAGACCTGCGGCGAGTGCTCATTCTAGACAACTCACCCGCCTCCTATGTCT
TCCATCCAGACAATGCCGTACCAGTGGCCTCGTGGTTTGACAACATGAGTGACACTGAGCTACACGATCTCTTACCCTTC
TTTGAGCAACTCAGCCGCGTGGACGACGTATACTCAGTGCTCAGACAGCCTAGGCCCGGGAGCTAG
ATGGACAGCTCGGCCGTCATTACTCAGATCAGCAAGGAGGAGGCGCGGGGCCCGCTGCGGGGCAAAGGTGACCAGAAGTC
AGCAGTTTCCCAGAAGCCCCGGAGTCGGGGCATCCTCCACTCCCTCTTCTGCTGTGTCTGCCGGGATGATGGGGAGCCCC
TACCTGCCCACAGTGGGGCTCCCCTGCTGGTGGAGGAAAATGGCGCCATCCCTAAGCACACCCCAGTCCAGTACCTGCTT
CCCGAGGCCAAGGCCCAGGACTCAGACAAGATCTGCGTCGTCATCGACCTGGACGAGACCCTGGTGCACAGCTCCTTCAA
GCCAGTGAACAATGCGGACTTCATCATCCCGGTGGAGATAGATGGAGTGGTCCACCAGGTCTATGTGCTGAAGCGGCCCC
ACGTAGATGAGTTCCTACAGCGAATGGGCGAGCTCTTTGAATGTGTGCTGTTCACTGCCAGCCTTGCCAAGTACGCAGAC
CCTGTAGCTGATCTGCTGGACAAGTGGGGAGCCTTCCGTGCCAGGCTGTTTCGAGAGTCGTGTGTCTTCCACCGGGGGAA
CTACGTAAAGGACCTGAGCAGGCTGGGCCGAGACCTGCGGCGAGTGCTCATTCTAGACAACTCACCCGCCTCCTATGTCT
TCCATCCAGACAATGCCGTACCAGTGGCCTCGTGGTTTGACAACATGAGTGACACTGAGCTACACGATCTCTTACCCTTC
TTTGAGCAACTCAGCCGCGTGGACGACGTATACTCAGTGCTCAGACAGCCTAGGCCCGGGAGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 17 .20 RPM |
| SRP007412_cerebellum | 22 .10 RPM |
| SRP007412_heart | 87 .13 RPM |
| SRP007412_kidney | 94 .13 RPM |
| SRP007412_liver | 101 .70 RPM |
| SRP007412_testis | 8 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000078429 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000015295 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1069 | 99.26 | 52.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1156 | 86.03 | 52.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000026176 retrocopies