Parental gene: | Atg4b, ENSMUSG00000026280 |
| Aliases: | Atg4b, 2510009N07Rik, AW048066, Apg4b, Atg4bl, Autl1 |
| Description: | autophagy related 4B, cysteine peptidase [Source:MGI Symbol;Acc:MGI:1913865] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 1:93751499..93789434(+) |
>ENSMUSG00000026280
ATGGACGCAGCCACTTTGACATATGATACTCTCCGGTTTGCTGAATTTGAAGATTTCCCTGAGACCTCAGAGCCTGTTTG
GATTCTGGGCAGAAAATACAGCATTTTCACAGAGAAGGACGAAATCTTGTCTGATGTTGCATCCAGACTTTGGTTTACAT
ACAGGAGAAACTTTCCAGCTATTGGGGGAACTGGCCCTACTTCAGACACAGGCTGGGGTTGCATGCTTCGGTGTGGACAG
ATGATCTTTGCCCAGGCCCTGGTATGCCGGCACTTAGGTCGAGATTGGAGGTGGACTCAGCGGAAGAGGCAGCCTGACAG
CTACTTTAATGTCCTCAATGCTTTCCTCGACAGGAAGGACAGCTACTATTCCATCCATCAGATAGCGCAAATGGGAGTTG
GCGAAGGCAAGTCTATAGGCCAGTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAAGAAACTTGCTGTATTCGACACA
TGGAGTTCCTTGGCTGTTCACATAGCAATGGACAACACTGTGGTGATGGAGGAAATCAGAAGGTTATGCAGGGCCAACCT
TCCCTGTGTTGGGGCGGCTGCACTTCCTACTGATTCAGAGAGGCACTGTAATGGGTTCCCTGCTGGAGCTGAAGTCACCA
ACAGGCCATCGGCTTGGAGACCACTAGTGCTTCTCATCCCTCTCCGCCTGGGACTGACAGACATCAATGAGGCCTATGTG
GAGACGCTGAAGCACTGTTTCATGATGCCCCAGTCCCTGGGTGTTATTGGAGGGAAGCCCAACAGTGCCCACTACTTTAT
TGGCTATGTTGGGGAGGAGCTCATCTATCTGGACCCCCACACTACACAGCCTGCAGTGGAGCTGACTGACAGCTGCTTCA
TCCCCGACGAGAGCTTCCACTGCCAGCACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCCGTCCATTGCTGTGGGG
TTTTTCTGTAAGACGGAGGAAGACTTTAACGACTGGTGTCAGCAAGTCAAAAAGCTATCCCAGCTTGGAGGTGCCCTGCC
CATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCTGTCCCTAGACTCTTCTGATG
TAGAGAGACTGGAGAGGTTTTTTGACTCTGAGGATGAAGACTTTGAAATCTTATCCCTCTGA
ATGGACGCAGCCACTTTGACATATGATACTCTCCGGTTTGCTGAATTTGAAGATTTCCCTGAGACCTCAGAGCCTGTTTG
GATTCTGGGCAGAAAATACAGCATTTTCACAGAGAAGGACGAAATCTTGTCTGATGTTGCATCCAGACTTTGGTTTACAT
ACAGGAGAAACTTTCCAGCTATTGGGGGAACTGGCCCTACTTCAGACACAGGCTGGGGTTGCATGCTTCGGTGTGGACAG
ATGATCTTTGCCCAGGCCCTGGTATGCCGGCACTTAGGTCGAGATTGGAGGTGGACTCAGCGGAAGAGGCAGCCTGACAG
CTACTTTAATGTCCTCAATGCTTTCCTCGACAGGAAGGACAGCTACTATTCCATCCATCAGATAGCGCAAATGGGAGTTG
GCGAAGGCAAGTCTATAGGCCAGTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAAGAAACTTGCTGTATTCGACACA
TGGAGTTCCTTGGCTGTTCACATAGCAATGGACAACACTGTGGTGATGGAGGAAATCAGAAGGTTATGCAGGGCCAACCT
TCCCTGTGTTGGGGCGGCTGCACTTCCTACTGATTCAGAGAGGCACTGTAATGGGTTCCCTGCTGGAGCTGAAGTCACCA
ACAGGCCATCGGCTTGGAGACCACTAGTGCTTCTCATCCCTCTCCGCCTGGGACTGACAGACATCAATGAGGCCTATGTG
GAGACGCTGAAGCACTGTTTCATGATGCCCCAGTCCCTGGGTGTTATTGGAGGGAAGCCCAACAGTGCCCACTACTTTAT
TGGCTATGTTGGGGAGGAGCTCATCTATCTGGACCCCCACACTACACAGCCTGCAGTGGAGCTGACTGACAGCTGCTTCA
TCCCCGACGAGAGCTTCCACTGCCAGCACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCCGTCCATTGCTGTGGGG
TTTTTCTGTAAGACGGAGGAAGACTTTAACGACTGGTGTCAGCAAGTCAAAAAGCTATCCCAGCTTGGAGGTGCCCTGCC
CATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCTGTCCCTAGACTCTTCTGATG
TAGAGAGACTGGAGAGGTTTTTTGACTCTGAGGATGAAGACTTTGAAATCTTATCCCTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 51 .59 RPM |
| SRP007412_cerebellum | 52 .28 RPM |
| SRP007412_heart | 22 .82 RPM |
| SRP007412_kidney | 28 .32 RPM |
| SRP007412_liver | 21 .90 RPM |
| SRP007412_testis | 25 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000079418 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_3387 | 81.60 | 63.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000026280 retrocopies