Parental gene: | Atg4a, ENSMUSG00000079418 |
| Aliases: | Atg4a, AI627006, AV169859, Apg4a, Atg4al, Autl2 |
| Description: | autophagy related 4A, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2147903] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | X:140956906..141164270(+) |
>ENSMUSG00000079418
ATGGAGTCAGTTATGTCCAAGTATGAAAACCAGATTCTTATTTTCCCTGACTACCTGGAAGAATTCCCGGATACAGATGA
GCTGGTATGGATTCTGGGGAAGCAGCACCCCCTTAAGACAGAAAAATCTAAGCTGTTGTCTGATATAAGTGCTCGTCTAT
GGTTTACATACAGAAGGAAGTTTTCCCCGATTGGGGGAACAGGCCCTTCATCTGATGCTGGATGGGGATGTATGCTGCGC
TGTGGGCAGATGATGCTGGCTCAAGCCCTCATCTGCAGACACTTGGGAAGGGATTGGAACTGGGAGAGACAAAAAGAACA
ACCCAAAGAATACCAAAGGATACTGCAGTGTTTCCTAGATAGAAAAGACTGTTGCTATTCAATCCATCAGATGGCACAAA
TGGGTGTAGGAGAAGGGAAATCAATTGGCGAATGGTTTGGACCAAACACAGTTGCACAGGTGATAAAAAAACTCGCTTTA
TTTGATGAATGGAATTCCTTGGCTGTTTATGTTTCCATGGATAACACAGTGGTCATTGAAGATATCAAGAAAATGTGCTG
TGTTCTTCCTGTGGGTGCTGCTGACCCAGCTGGTGATTTTCTGACTGCATCCAATCAGAGTAGAGACACCTCTGTCCCGT
GCTCAGCCTGGAAACCCCTGCTGCTCATTGTGCCCCTTCGCCTGGGCATAAACCAAATCAATCCTGTGTATGTTGAAGCA
TTCAAAGAGTGTTTTAAGATGCCACAGTCTTTAGGGGCTTTAGGAGGAAAGCCAAATAACGCCTATTATTTCATAGGATT
CTTAGGAGATGAGCTCATTTTTTTGGACCCTCACACAACCCAGACTTTTGTTGACATTGAAGAGAGTGGACTAGTAGACG
ACCAGACTTTTCATTGCCTGCAGTCTCCACAGCGGATGAGTATCCTGAACTTGGATCCTTCTGTGGCCTTGGGATTTTTC
TGCAAAGAAGAGAAAGACTTTGATAATTGGTGTAGCCTTGTTCAGAAGGAAATTCTAAAGGAGAATTTGAGGATGTTTGA
ATTGGTTCAGAAGCACCCATCACACTGGCCTCCCTTTGTACCTCCAGCCAAGCCAGAAGTGACAACCACAGGGGCAGAAT
TCATAGAGTCGACTGAACAACTGGAGGACTTTGAGCTGGAGGAAGATTTTGAAATTCTGAGTGTAGGCTAG
ATGGAGTCAGTTATGTCCAAGTATGAAAACCAGATTCTTATTTTCCCTGACTACCTGGAAGAATTCCCGGATACAGATGA
GCTGGTATGGATTCTGGGGAAGCAGCACCCCCTTAAGACAGAAAAATCTAAGCTGTTGTCTGATATAAGTGCTCGTCTAT
GGTTTACATACAGAAGGAAGTTTTCCCCGATTGGGGGAACAGGCCCTTCATCTGATGCTGGATGGGGATGTATGCTGCGC
TGTGGGCAGATGATGCTGGCTCAAGCCCTCATCTGCAGACACTTGGGAAGGGATTGGAACTGGGAGAGACAAAAAGAACA
ACCCAAAGAATACCAAAGGATACTGCAGTGTTTCCTAGATAGAAAAGACTGTTGCTATTCAATCCATCAGATGGCACAAA
TGGGTGTAGGAGAAGGGAAATCAATTGGCGAATGGTTTGGACCAAACACAGTTGCACAGGTGATAAAAAAACTCGCTTTA
TTTGATGAATGGAATTCCTTGGCTGTTTATGTTTCCATGGATAACACAGTGGTCATTGAAGATATCAAGAAAATGTGCTG
TGTTCTTCCTGTGGGTGCTGCTGACCCAGCTGGTGATTTTCTGACTGCATCCAATCAGAGTAGAGACACCTCTGTCCCGT
GCTCAGCCTGGAAACCCCTGCTGCTCATTGTGCCCCTTCGCCTGGGCATAAACCAAATCAATCCTGTGTATGTTGAAGCA
TTCAAAGAGTGTTTTAAGATGCCACAGTCTTTAGGGGCTTTAGGAGGAAAGCCAAATAACGCCTATTATTTCATAGGATT
CTTAGGAGATGAGCTCATTTTTTTGGACCCTCACACAACCCAGACTTTTGTTGACATTGAAGAGAGTGGACTAGTAGACG
ACCAGACTTTTCATTGCCTGCAGTCTCCACAGCGGATGAGTATCCTGAACTTGGATCCTTCTGTGGCCTTGGGATTTTTC
TGCAAAGAAGAGAAAGACTTTGATAATTGGTGTAGCCTTGTTCAGAAGGAAATTCTAAAGGAGAATTTGAGGATGTTTGA
ATTGGTTCAGAAGCACCCATCACACTGGCCTCCCTTTGTACCTCCAGCCAAGCCAGAAGTGACAACCACAGGGGCAGAAT
TCATAGAGTCGACTGAACAACTGGAGGACTTTGAGCTGGAGGAAGATTTTGAAATTCTGAGTGTAGGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 3 .32 RPM |
| SRP007412_cerebellum | 3 .08 RPM |
| SRP007412_heart | 6 .10 RPM |
| SRP007412_kidney | 7 .76 RPM |
| SRP007412_liver | 3 .80 RPM |
| SRP007412_testis | 0 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000002971 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026280 | within_species_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014016 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020619 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022170 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2283 | 99.24 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000079418 retrocopies