Parental gene: | Ppid, ENSMUSG00000027804 |
| Aliases: | Ppid, 4930564J03Rik, CYP-40, Ppidl, Ppif |
| Description: | peptidylprolyl isomerase D (cyclophilin D) [Source:MGI Symbol;Acc:MGI:1914988] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:79591341..79603650(+) |
>ENSMUSG00000027804
ATGTCCCACGCATCCCCGGCAGCCAAGCCCTCCAACTCCAAGAACCCGCGAGTCTTCTTTGACGTGGACATCGGCGGGGA
GCGAGTTGGCCGAATTGTTTTAGAATTGTTTGCAGATATTGTTCCCAAAACTGCAGAAAATTTTCGTGCGTTGTGTACAG
GAGAAAAAGGAACTGGGTCCACGACCGGGAAGCCTCTCCATTTTAAAGGATGCCCTTTCCACCGAATTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGGACAGGTGGCGAAAGTATTTATGGTGAAAAATTTGAAGATGAAAA
TTTTCATTATAAGCATGATCGGGAGGGTTTGCTGAGCATGGCAAATGCAGGCCCCAATACGAATGGCTCTCAGTTCTTTA
TCACAACAGTTCCGACTCCTCATCTGGACGGGAAACATGTGGTATTTGGTCAGGTCATAAAAGGACTAGGTGTGGCAAGG
ACGCTTGAAAATGTAGAGGTGAATGGTGAAAAACCTGCCAAACTCTGTGTTATTGCAGAATGTGGAGAATTGAAAGAAGG
GGATGACTGGGGAATCTTCCCCAAAGATGGCTCTGGTGACAGTCATCCAGACTTCCCTGAGGATGCAGATATAGATTTAA
AAGATGTAGATAAAATTTTATTAATATCTGAAGACTTAAAAAACATTGGAAATACTTTTTTCAAGTCTCAGAACTGGGAG
ATGGCTATTAAAAAATATGCGAAGGTTTTAAGGTATGTGGATAGTTCAAAGGCTGTTATTGAGAAAGCAGATAGATCCAG
ACTGCAACCTATAGCCTTAAGTTGTGTGCTGAATATTGGTGCTTGTAAGCTGAAGATGTCAAATTGGCAGGGGGCAATTG
ACAGTTGCTTAGAGGCTCTTGAAATGGACCCTTCAAATACTAAAGCACTATACCGAAAAGCGCAAGGATGGCAAGGATTG
AAAGAATATGATCAAGCATTGGCTGATCTTAAGAAGGCACAGGAGATAGCCCCAGGAGATAAAGCTATCCAGGCAGAATT
GCTTAAAGTCAAACAAATGATAAAGGCACAGAAAGATAAAGAGAAGGCCGTGTATGCAAAAATGTTTGCTTAA
ATGTCCCACGCATCCCCGGCAGCCAAGCCCTCCAACTCCAAGAACCCGCGAGTCTTCTTTGACGTGGACATCGGCGGGGA
GCGAGTTGGCCGAATTGTTTTAGAATTGTTTGCAGATATTGTTCCCAAAACTGCAGAAAATTTTCGTGCGTTGTGTACAG
GAGAAAAAGGAACTGGGTCCACGACCGGGAAGCCTCTCCATTTTAAAGGATGCCCTTTCCACCGAATTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGGACAGGTGGCGAAAGTATTTATGGTGAAAAATTTGAAGATGAAAA
TTTTCATTATAAGCATGATCGGGAGGGTTTGCTGAGCATGGCAAATGCAGGCCCCAATACGAATGGCTCTCAGTTCTTTA
TCACAACAGTTCCGACTCCTCATCTGGACGGGAAACATGTGGTATTTGGTCAGGTCATAAAAGGACTAGGTGTGGCAAGG
ACGCTTGAAAATGTAGAGGTGAATGGTGAAAAACCTGCCAAACTCTGTGTTATTGCAGAATGTGGAGAATTGAAAGAAGG
GGATGACTGGGGAATCTTCCCCAAAGATGGCTCTGGTGACAGTCATCCAGACTTCCCTGAGGATGCAGATATAGATTTAA
AAGATGTAGATAAAATTTTATTAATATCTGAAGACTTAAAAAACATTGGAAATACTTTTTTCAAGTCTCAGAACTGGGAG
ATGGCTATTAAAAAATATGCGAAGGTTTTAAGGTATGTGGATAGTTCAAAGGCTGTTATTGAGAAAGCAGATAGATCCAG
ACTGCAACCTATAGCCTTAAGTTGTGTGCTGAATATTGGTGCTTGTAAGCTGAAGATGTCAAATTGGCAGGGGGCAATTG
ACAGTTGCTTAGAGGCTCTTGAAATGGACCCTTCAAATACTAAAGCACTATACCGAAAAGCGCAAGGATGGCAAGGATTG
AAAGAATATGATCAAGCATTGGCTGATCTTAAGAAGGCACAGGAGATAGCCCCAGGAGATAAAGCTATCCAGGCAGAATT
GCTTAAAGTCAAACAAATGATAAAGGCACAGAAAGATAAAGAGAAGGCCGTGTATGCAAAAATGTTTGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 49 .39 RPM |
| SRP007412_cerebellum | 41 .21 RPM |
| SRP007412_heart | 28 .61 RPM |
| SRP007412_kidney | 30 .09 RPM |
| SRP007412_liver | 28 .67 RPM |
| SRP007412_testis | 29 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000012655 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000017768 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000027408 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_616 | 88.38 | 99.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1086 | 92.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1888 | 86.31 | 89.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_2228 | 64.62 | 69.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_2555 | 94.74 | 61.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_3254 | 66.36 | 58.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000027804 retrocopies