Parental gene: | Ccdc115, ENSMUSG00000042111 |
| Aliases: | Ccdc115, 2310061I09Rik, Ccp1 |
| Description: | coiled-coil domain containing 115 [Source:MGI Symbol;Acc:MGI:1916918] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 1:34436670..34439672(-) |
>ENSMUSG00000042111
ATGGCGGTCCAGGCTCTGCGAGAGGAGTTGGACTCCAAGTGCCTACAGCTGCTCAGTGACCTGGAGGAACTGGAGGCGAA
GCGGGCGGCGCTGAACGCCAGGGTGGAGGAGGGTTGGCTCTCACTTGCCAAGGCTCGCTATGCCATGGGAGCCAAGTCGG
TAGGACCCCTGCAGTATGCCTCGCGTATGGAGCCTCAGGTCTGCGTGCGTGCCAGCGAGGCCCAGGATGGACCCCAGACC
TTCAGGGTGATCAAAGCTGACGCCCAGACCCCCGAGGAAGTGGGGCCTAGCGAAGCATCTCTGCGCAGGCGCAAGGGCCC
CACCAAGACCAAAGAGTTAGGATCTGCTGTAGTTCCTCAAGATCCCTTGAACTGGTTTGGAATTTTGGTTCCTCACAGTC
TGCGGCAGGCCCAAGCCAGCTTCCGGGATGGCCTACAGCTGGCTGCAGATATAGCCAGTCTCCAGACTCGCATCAACTGG
GGTCAGAGTCAGCTTCGAGGCCTCCAGAAAAAACTGAAGGAGTTGGACCCTGGGCCTGCCTGA
ATGGCGGTCCAGGCTCTGCGAGAGGAGTTGGACTCCAAGTGCCTACAGCTGCTCAGTGACCTGGAGGAACTGGAGGCGAA
GCGGGCGGCGCTGAACGCCAGGGTGGAGGAGGGTTGGCTCTCACTTGCCAAGGCTCGCTATGCCATGGGAGCCAAGTCGG
TAGGACCCCTGCAGTATGCCTCGCGTATGGAGCCTCAGGTCTGCGTGCGTGCCAGCGAGGCCCAGGATGGACCCCAGACC
TTCAGGGTGATCAAAGCTGACGCCCAGACCCCCGAGGAAGTGGGGCCTAGCGAAGCATCTCTGCGCAGGCGCAAGGGCCC
CACCAAGACCAAAGAGTTAGGATCTGCTGTAGTTCCTCAAGATCCCTTGAACTGGTTTGGAATTTTGGTTCCTCACAGTC
TGCGGCAGGCCCAAGCCAGCTTCCGGGATGGCCTACAGCTGGCTGCAGATATAGCCAGTCTCCAGACTCGCATCAACTGG
GGTCAGAGTCAGCTTCGAGGCCTCCAGAAAAAACTGAAGGAGTTGGACCCTGGGCCTGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 9 .91 RPM |
| SRP007412_cerebellum | 9 .99 RPM |
| SRP007412_heart | 11 .77 RPM |
| SRP007412_kidney | 10 .72 RPM |
| SRP007412_liver | 7 .02 RPM |
| SRP007412_testis | 10 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000010588 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005099 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000166 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000012598 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_380 | 73.84 | 92.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2696 | 98.77 | 90.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000042111 retrocopies