Parental gene: | ZRANB2, ENSOCUG00000004640 |
| Aliases: | None |
| Description: | zinc finger, RAN-binding domain containing 2 [Source:HGNC Symbol;Acc:13058] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 13:94968707..94983515(+) |
>ENSOCUG00000004640
ATGTCGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGATTTGCCCTGACAAAAAATGTGGAAACGTAAACTTTGCTAG
AAGAACCAGTTGTAATCGATGTGGTCGGGAGAAAACAACTGAAGCCAAGATGATGAAAGCTGGAGGCACTGAAATAGGAA
AGACACTTGCAGAAAAGAGCCGAGGCCTATTTAGTGCTAATGATTGGCAGTGTAAAACCTGCAGTAATGTGAATTGGGCC
AGAAGATCAGAATGTAATATGTGTAATACTCCGAAGTATGCTAAACTAGAAGAAAGAACAGGATATGGTGGTGGTTTTAA
TGAAAGAGAAAATGTTGAATATATAGAAAGAGAAGAGTCTGATGGTGAATATGATGAGTTTGGACGTAAGAAGAAAAAAT
ACAGAGGAAAGGCAGTTGGTCCTGCATCTATATTAAAAGAAGTTGAAGACAAAGAATCAGAGGGAGAAGAAGAGGATGAG
GATGAAGATCTTTCTAAATATAAATTAGATGAGGATGAAGATGAAGATGATGCCGATCTCTCAAAATATAATCTTGATGC
CAGTGAAGAAGAAGATAGTAGTAATAAAAAGAAGTCTAGTAGACGAAGTCGCTCAAAGTCTCGATCTTCACATTCACGGT
CTTCATCACGCTCATCCTCCCCCTCAAGTTCAAGGTCTAGGTCCAGGTCCCGTTCAAGGAGTTCTTCCAGTTCGCAGTCA
AGATCTCGTTCCAGTTCCAGAGAACGTTCGAGATCTCGTGGGTCGAAATCAAGATCCAGCTCCAGGTCCCACAGGGGCTC
TTCTTCCCCACGAAAAAGATCTTACTCAAGTTCATCATCTTCTCCTGAGAGGAACAGAAAGAGAAGTCGTTCTAGATCTT
CTTCATCCGGTGATCGCAAAAAAAGACGAACAAGATCACGGTCACCCGAAAGGCACCACAGGTCATCTTCTGGATCGTCC
CATTCTGGTTCCCGTTCAAGTTCAAAAAAGAAATAA
ATGTCGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGATTTGCCCTGACAAAAAATGTGGAAACGTAAACTTTGCTAG
AAGAACCAGTTGTAATCGATGTGGTCGGGAGAAAACAACTGAAGCCAAGATGATGAAAGCTGGAGGCACTGAAATAGGAA
AGACACTTGCAGAAAAGAGCCGAGGCCTATTTAGTGCTAATGATTGGCAGTGTAAAACCTGCAGTAATGTGAATTGGGCC
AGAAGATCAGAATGTAATATGTGTAATACTCCGAAGTATGCTAAACTAGAAGAAAGAACAGGATATGGTGGTGGTTTTAA
TGAAAGAGAAAATGTTGAATATATAGAAAGAGAAGAGTCTGATGGTGAATATGATGAGTTTGGACGTAAGAAGAAAAAAT
ACAGAGGAAAGGCAGTTGGTCCTGCATCTATATTAAAAGAAGTTGAAGACAAAGAATCAGAGGGAGAAGAAGAGGATGAG
GATGAAGATCTTTCTAAATATAAATTAGATGAGGATGAAGATGAAGATGATGCCGATCTCTCAAAATATAATCTTGATGC
CAGTGAAGAAGAAGATAGTAGTAATAAAAAGAAGTCTAGTAGACGAAGTCGCTCAAAGTCTCGATCTTCACATTCACGGT
CTTCATCACGCTCATCCTCCCCCTCAAGTTCAAGGTCTAGGTCCAGGTCCCGTTCAAGGAGTTCTTCCAGTTCGCAGTCA
AGATCTCGTTCCAGTTCCAGAGAACGTTCGAGATCTCGTGGGTCGAAATCAAGATCCAGCTCCAGGTCCCACAGGGGCTC
TTCTTCCCCACGAAAAAGATCTTACTCAAGTTCATCATCTTCTCCTGAGAGGAACAGAAAGAGAAGTCGTTCTAGATCTT
CTTCATCCGGTGATCGCAAAAAAAGACGAACAAGATCACGGTCACCCGAAAGGCACCACAGGTCATCTTCTGGATCGTCC
CATTCTGGTTCCCGTTCAAGTTCAAAAAAGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 20 .58 RPM |
| SRP017611_kidney | 44 .39 RPM |
| SRP017611_brain | 76 .88 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006356 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000000504 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000000485 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000000856 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_776 | 70.68 | 91.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1170 | 81.77 | 54.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000004640 retrocopies