Parental gene: | DNAJA2, ENSOCUG00000004839 |
| Aliases: | None |
| Description: | DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:HGNC Symbol;Acc:14884] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018743:979623..999765(+) |
>ENSOCUG00000004839
ATGGCGAACGTGGCCGACACGAAGCTGTACGACATCCTGGGCGTCCCGCCGGGCGCCAGCGAGAATGAGCTGAAGAAGGC
ATACAGAAAATTAGCCAAGGAATACCATCCTGATAAGAATCCAAATGCTGGAGACAAATTCAAAGAAATAAGCTTTGCAT
ATGAAGTTCTATCAAATCCCGAGAAGCGTGAATTATATGACAGATATGGAGAACAAGGGCTTCGGGAAGGTAGTGGCGGC
GGTGGTGGCATGGATGACATTTTCTCTCACATTTTTGGTGGGGGATTGTTCGGCTTTATGGGCAATCAGAGTAGAAGTCG
AAACGGCAGAAGAAGAGGAGAGGACATGATGCATCCACTCAAAGTATCTTTAGAAGATCTGTATAATGGCAAGACAACCA
AACTACAACTTAGCAAGAATGTACTCTGCAGTGCGTGCAGCGGCCAAGGTGGGAAGTCTGGAGCAGTTCAGAAGTGCAGT
GCTTGTCGAGGTCGAGGTGTACGCATCATGATCAGACAGCTGGCTCCAGGGATGGTACAGCAGATGCAGTCTGTGTGCTC
TGATTGCAATGGAGAAGGAGAAGTAATTAATGAAAAGGACCGCTGTAAAAAATGCGAAGGGAAGAAAGTGATTAAAGAAG
TCAAAATTCTTGAAGTCCATGTAGACAAAGGCATGAAACACGGACAGAGAATTACATTCACTGGGGAAGCAGACCAGGCT
CCTGGGGTGGAACCAGGGGACATTGTTCTTTTGCTGCAGGAAAAAGAACATGAGGTGTTCCAGAGAGATGGAAATGATTT
ACATATGACATATAAGATAGGACTTGTTGAAGCCCTGTGTGGATTTCAGTTCACATTTAAGCACCTTGATGCCCGTCAGA
TTGTGGTGAAATACCCCCCTGGCAAAGTAATTGAACCAGGATGTGTTCGTGTGGTTCGAGGTGAAGGAATGCCACAGTAT
CGTAATCCCTTTGAAAAGGGGGATCTTTACATAAAGTTTGATGTGCAGTTTCCTGAAAACAACTGGATCAACCCAGACAA
GCTTTCTGAACTAGAAGATCTTCTGCCATCTAGACCAGAAGTTCCTAACATAATTGGAGAAACGGAGGAGGTAGAGCTTC
AGGAATTTGATAGCACACGAGGCTCAGGAGGTGGTCAGAGGCGCGAGGCCTACAATGATAGCTCTGATGAGGAAAGCAGC
AGCCATCATGGACCTGGAGTGCAGTGTGCCCATCAGTAA
ATGGCGAACGTGGCCGACACGAAGCTGTACGACATCCTGGGCGTCCCGCCGGGCGCCAGCGAGAATGAGCTGAAGAAGGC
ATACAGAAAATTAGCCAAGGAATACCATCCTGATAAGAATCCAAATGCTGGAGACAAATTCAAAGAAATAAGCTTTGCAT
ATGAAGTTCTATCAAATCCCGAGAAGCGTGAATTATATGACAGATATGGAGAACAAGGGCTTCGGGAAGGTAGTGGCGGC
GGTGGTGGCATGGATGACATTTTCTCTCACATTTTTGGTGGGGGATTGTTCGGCTTTATGGGCAATCAGAGTAGAAGTCG
AAACGGCAGAAGAAGAGGAGAGGACATGATGCATCCACTCAAAGTATCTTTAGAAGATCTGTATAATGGCAAGACAACCA
AACTACAACTTAGCAAGAATGTACTCTGCAGTGCGTGCAGCGGCCAAGGTGGGAAGTCTGGAGCAGTTCAGAAGTGCAGT
GCTTGTCGAGGTCGAGGTGTACGCATCATGATCAGACAGCTGGCTCCAGGGATGGTACAGCAGATGCAGTCTGTGTGCTC
TGATTGCAATGGAGAAGGAGAAGTAATTAATGAAAAGGACCGCTGTAAAAAATGCGAAGGGAAGAAAGTGATTAAAGAAG
TCAAAATTCTTGAAGTCCATGTAGACAAAGGCATGAAACACGGACAGAGAATTACATTCACTGGGGAAGCAGACCAGGCT
CCTGGGGTGGAACCAGGGGACATTGTTCTTTTGCTGCAGGAAAAAGAACATGAGGTGTTCCAGAGAGATGGAAATGATTT
ACATATGACATATAAGATAGGACTTGTTGAAGCCCTGTGTGGATTTCAGTTCACATTTAAGCACCTTGATGCCCGTCAGA
TTGTGGTGAAATACCCCCCTGGCAAAGTAATTGAACCAGGATGTGTTCGTGTGGTTCGAGGTGAAGGAATGCCACAGTAT
CGTAATCCCTTTGAAAAGGGGGATCTTTACATAAAGTTTGATGTGCAGTTTCCTGAAAACAACTGGATCAACCCAGACAA
GCTTTCTGAACTAGAAGATCTTCTGCCATCTAGACCAGAAGTTCCTAACATAATTGGAGAAACGGAGGAGGTAGAGCTTC
AGGAATTTGATAGCACACGAGGCTCAGGAGGTGGTCAGAGGCGCGAGGCCTACAATGATAGCTCTGATGAGGAAAGCAGC
AGCCATCATGGACCTGGAGTGCAGTGTGCCCATCAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 48 .71 RPM |
| SRP017611_kidney | 87 .07 RPM |
| SRP017611_brain | 137 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000003757 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000006955 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013794 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002247 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004833 | within_species_paralog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016251 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1126 | 93.75 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000004839 retrocopies