Parental gene: | RTCB, ENSOCUG00000008270 |
| Aliases: | None |
| Description: | RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:26935] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 4:88698720..88727046(+) |
>ENSOCUG00000008270
ATGAGCCGCTCGTATAACGATGAGCTCCAGTTCCTGGAAAAGATCAACAAGAACTGCTGGAGGATCAAGAAGGGCTTCGT
GCCCAACATGCAGGTTGAAGGAGTCTTCTACGTGAACGATGCTCTGGAGAAGCTGATGTTTGAGGAATTAAGGAATGCCT
GTCGGGGGGGTGGTGTTGGTGGCTTCCTGCCAGCTATGAAGCAGATTGGCAATGTGGCAGCCCTGCCTGGGATTGTTCAT
CGATCCATTGGGCTTCCCGACGTCCATTCAGGCTATGGATTTGCCATTGGGAATATGGCAGCCTTTGATATGAATGACCC
GGAAGCAGTGGTATCCCCAGGTGGTGTCGGATTTGACATCAACTGTGGTGTCCGCTTGCTGAGAACCAATTTAGATGAAA
GTGATGTCCAGCCTGTGAAGGAGCAGCTTGCACAAGCCATGTTTGACCACATTCCCGTTGGGGTGGGATCAAAAGGTGTC
ATTCCAATGAATGCCAAAGACTTGGAGGAGGCCTTGGAGATGGGTGTGGACTGGTCTCTAAGAGAAGGCTATGCCTGGGC
CGAAGACAAGGAGCACTGTGAGGAGTACGGAAGGATGCTGCAAGCCGACCCCAATAAGGTGTCTCCACGAGCCAAAAAAA
GAGGCCTTCCTCAGTTGGGGACCCTGGGAGCAGGCAACCACTATGCAGAAATCCAGGTTGTAGATGAGATCTTCAATGAA
TATGCGGCCAAGAAAATGGGCATCGACCATAAGGGACAGGTGTGCGTGATGATCCACAGTGGGAGCAGAGGCCTGGGCCA
CCAGGTAGCCACAGATGCACTGGTGGCTATGGAAAAAGCCATGAAGAGAGACAAGATCATCGTAAATGACCGTCAGCTGG
CTTGTGCACGAATCGCTTCCGTGGAAGGTCAGGACTACCTGAAGGGAATGGCAGCGGCTGGGAACTACGCCTGGGTCAAC
CGCTCTTCCATGACTTTCTTAACCCGCCAGGCTTTTGCCAAGGTCTTCAACACAACCCCTGATGACTTGGACCTGCACGT
GATCTATGATGTCTCTCACAACATCGCCAAGGTCGAGCAGCACGTGGTGGACGGGAAGGAGCGGACGCTGCTGGTGCACA
GGAAGGGATCCACCCGGGCTTTCCCTCCTCACCATCCCCTCATCGCGGTTGATTACCAGCTCACTGGACAACCAGTGCTC
ATTGGTGGCACCATGGGAACCTGCAGTTACGTCCTTACTGGCACTGAACAGGGCATGACTGAGACCTTTGGAACAACCTG
TCATGGAGCGGGCCGTGCATTGTCCCGAGCAAAATCTCGGCGTAATCTAGATTTCCAGGATGTCTTAGACAAACTGGCAG
ATATGGGGATCGCAATCCGTGTTGCCTCGCCCAAACTGGTTATGGAAGAGGTAAGTGGAATTTGGGACATATTCAGCATA
AATCCATGCATGGTTTATATCAGTACACGATGA
ATGAGCCGCTCGTATAACGATGAGCTCCAGTTCCTGGAAAAGATCAACAAGAACTGCTGGAGGATCAAGAAGGGCTTCGT
GCCCAACATGCAGGTTGAAGGAGTCTTCTACGTGAACGATGCTCTGGAGAAGCTGATGTTTGAGGAATTAAGGAATGCCT
GTCGGGGGGGTGGTGTTGGTGGCTTCCTGCCAGCTATGAAGCAGATTGGCAATGTGGCAGCCCTGCCTGGGATTGTTCAT
CGATCCATTGGGCTTCCCGACGTCCATTCAGGCTATGGATTTGCCATTGGGAATATGGCAGCCTTTGATATGAATGACCC
GGAAGCAGTGGTATCCCCAGGTGGTGTCGGATTTGACATCAACTGTGGTGTCCGCTTGCTGAGAACCAATTTAGATGAAA
GTGATGTCCAGCCTGTGAAGGAGCAGCTTGCACAAGCCATGTTTGACCACATTCCCGTTGGGGTGGGATCAAAAGGTGTC
ATTCCAATGAATGCCAAAGACTTGGAGGAGGCCTTGGAGATGGGTGTGGACTGGTCTCTAAGAGAAGGCTATGCCTGGGC
CGAAGACAAGGAGCACTGTGAGGAGTACGGAAGGATGCTGCAAGCCGACCCCAATAAGGTGTCTCCACGAGCCAAAAAAA
GAGGCCTTCCTCAGTTGGGGACCCTGGGAGCAGGCAACCACTATGCAGAAATCCAGGTTGTAGATGAGATCTTCAATGAA
TATGCGGCCAAGAAAATGGGCATCGACCATAAGGGACAGGTGTGCGTGATGATCCACAGTGGGAGCAGAGGCCTGGGCCA
CCAGGTAGCCACAGATGCACTGGTGGCTATGGAAAAAGCCATGAAGAGAGACAAGATCATCGTAAATGACCGTCAGCTGG
CTTGTGCACGAATCGCTTCCGTGGAAGGTCAGGACTACCTGAAGGGAATGGCAGCGGCTGGGAACTACGCCTGGGTCAAC
CGCTCTTCCATGACTTTCTTAACCCGCCAGGCTTTTGCCAAGGTCTTCAACACAACCCCTGATGACTTGGACCTGCACGT
GATCTATGATGTCTCTCACAACATCGCCAAGGTCGAGCAGCACGTGGTGGACGGGAAGGAGCGGACGCTGCTGGTGCACA
GGAAGGGATCCACCCGGGCTTTCCCTCCTCACCATCCCCTCATCGCGGTTGATTACCAGCTCACTGGACAACCAGTGCTC
ATTGGTGGCACCATGGGAACCTGCAGTTACGTCCTTACTGGCACTGAACAGGGCATGACTGAGACCTTTGGAACAACCTG
TCATGGAGCGGGCCGTGCATTGTCCCGAGCAAAATCTCGGCGTAATCTAGATTTCCAGGATGTCTTAGACAAACTGGCAG
ATATGGGGATCGCAATCCGTGTTGCCTCGCCCAAACTGGTTATGGAAGAGGTAAGTGGAATTTGGGACATATTCAGCATA
AATCCATGCATGGTTTATATCAGTACACGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 24 .28 RPM |
| SRP017611_kidney | 55 .75 RPM |
| SRP017611_brain | 66 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011070 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000001785 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007803 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1520 | 94.00 | 84.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000008270 retrocopies