Parental gene:

PPIB, ENSOCUG00000012012

Aliases:None
Description:peptidylprolyl isomerase B (cyclophilin B) [Source:HGNC Symbol;Acc:9255]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:17:8084938..8089475(+)


>ENSOCUG00000012012
ATGCTGCGCCTCTCGGAGCGGAACATGAAGGTGCTGTTTGCCGCCGCCCTCATCGTAGCCTCCGTTTTCTTCCTGCTGCT
GCCAGGACCCTCGGTGGCTGATGAGAAGAAGAAGGGGCCCAAAGTCACCGTCAAGGTGTACTTTGATCTGCGAATTGGAG
ATGAAGATGTAGGCCGGGTGGTCTTTGGTCTCTTTGGAAAGACTGTTCCGAAGACGGTGGATAATTTTGTGGCGTTAGCT
ACAGGGGAGAAAGGATTTGGCTACAAAAACAGCAAATTCCATCGTGTGATCAAGGACTTCATGATCCAGGGTGGCGACTT
CACCAGGGGAGACGGCACAGGAGGAAAGAGCATCTACGGGGAGCGCTTCCCTGATGAGAACTTCAAGCTGAAGCACTACG
GGCCCGGCTGGGTGAGCATGGCCAACGCCGGCGACACCAACGGCTCCCAGTTCTTCATCACCACAGTCAAGACGGCCTGG
CTGGACGGCAAGCACGTCGTGTTTGGCAAGTTCTGGAGGGCATGCCAGGAGGTGGTACGGAAGGTGGAGAGCACCAAGAC
GGACAGCCGGGACAAGCCCCTGAAGGATGTGGTCATCGCTGACTGCGGCAAGATCGAGGTGGAGAAGCCCTTTGCCATCG
CCAAGGAGTAG

Library Parental gene expression (RPM)
SRP017611_liver 111 .37 RPM
SRP017611_kidney 177 .07 RPM
SRP017611_brain 91 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017053 ortholog_one2one 1 retrogene
retro_cfam_1999,
Equus caballus ENSECAG00000017164 ortholog_one2one 1 retrogene
retro_ecab_617,
Echinops telfairi ENSETEG00000012671 ortholog_one2one 1 retrogene
retro_etel_1493,
Loxodonta africana ENSLAFG00000018698 ortholog_one2one 1 retrogene
retro_lafr_521,
Oryctolagus cuniculus ENSOCUG00000007046 within_species_paralog 2 retrogenes
retro_ocun_1493, retro_ocun_1759,
Oryctolagus cuniculus ENSOCUG00000007696 other_paralog 2 retrogenes
retro_ocun_661, retro_ocun_892,
Oryctolagus cuniculus ENSOCUG00000011453 within_species_paralog 1 retrogene
retro_ocun_1195,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_413 60.91 57.38
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000012012 retrocopies