Parental gene: | SHOC2, ENSOCUG00000014348 |
| Aliases: | None |
| Description: | soc-2 suppressor of clear homolog (C. elegans) [Source:HGNC Symbol;Acc:15454] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 18:58602602..58646095(+) |
>ENSOCUG00000014348
ATGAGTAGTAGTTTAGGAAAAGAAAAAGACTCTAAAGACAAAGATCCCAAAGTACCATCAGCTAAGGAAAGAGAAAAGGA
GGCAAAAGCCTCTGGAGGTTTTGGGAAAGAGAGCAAAGAAAAAGAACCTAAGACCAAAGGGAAAGATGCCAAAGAAGGAA
AGAAGGACTCCAGTGCTGCCCAACCAGGGGTGGCCTTTTCAGTTGACAATACGATCAAACGGCCAAACCCAGCACCTGGG
ACTAGAAAAAAATCTAGTAATGCAGAGGTGATTAAAGAGCTCAACAAATGTCGGGAAGAGAATTCAATGCGTTTGGACTT
ATCCAAGAGGTCTATACATATATTGCCATCATCAATCAAAGAATTGACTCAATTAACAGAACTTTATTTATACAGTAACA
AATTACAGTCCCTCCCAGCGGAGGTAGGCTGTCTAGTAAATCTCATGACACTGGCTCTAAGTGAAAATTCTCTTACCAGC
CTGCCTGACTCTCTTGATAACAAGAAGCTGCGAATGCTTGATTTACGACATAACAAACTAAGAGAAATTCCTTCAGTGGT
GTATAGGTTGGATTCTCTCACCACTCTATATCTTCGCTTTAATCGTATAACTACTGTGGAAAAGGACATCAAAAACCTGT
CAAAACTAAGCATGCTTAGTATTCGAGAGAACAAAATCAAACAACTACCTGCTGAAATTGGTGAATTATGTAACCTCATT
ACCCTGGATGTAGCCCACAATCAACTTGAACACCTTCCAAAGGAGATTGGAAACTGCACGCAGATAACCAACCTTGACTT
GCAGCACAATGAACTGCTAGACCTCCCAGATACTATAGGAAACCTGTCCAGTTTAAGTCGTCTTGGTCTAAGATATAATA
GACTATCAGCAATACCCAGATCATTAGCAAAATGCAGTGCACTGGAAGAATTAAATTTAGAGAACAATAACATTTCTACT
TTACCAGAGAGTCTTTTATCTAGTCTTGTGAAACTGAATAGTTTGACTTTAGCTAGAAATTGCTTCCAGTTATATCCAGT
AGGTGGTCCATCTCAATTTTCCACCATCTATTCTCTTAACATGGAACACAATCGAATCAATAAAATCCCATTTGGGATTT
TCTCCAGAGCAAAAGTATTAAGTAAGCTGAACATGAAGGACAATCAGTTAACATCTCTTCCCTTGGATTTTGGAACTTGG
ACTAGTATGGTAGAGTTGAATTTAGCTACTAATCAGCTCACAAAGATCCCTGAAGATGTGTCTGGTCTTGTTTCTCTAGA
GGTTCTAATATTATCAAACAATCTTCTCAAGAAGCTTCCCCATGGTCTTGGAAATCTTAGGAAGTTAAGAGAGTTGGATC
TAGAGGAGAATAAATTGGAATCCTTGCCAAATGAAATTGCTTATCTTAAGGATTTACAGAAATTAGTCTTGACAAACAAC
CAGTTGACCACTCTTCCCAGAGGCATTGGTCACCTTACCAATCTCACACATCTAGGCCTTGGAGAGAACCTACTTACTCA
TCTTCCTGAAGAAATTGCAGGTACACTGGAGAACCTAGAAGAACTGTATTTGAATGACAACCCCCACCTGCATAGCCTTC
CCTTTGAACTGGCTCTCTGCAGCAAGCTTTCAATCATGAGTATTGAGAACTGTCCACTCAGTCACCTTCCACCTCAGATT
GTTGCTGGGGGGCCTTCTTTCATCATTCAGTTCCTAAAGATGCAGGGTCCATATCGTGCCATGGTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 35 .60 RPM |
| SRP017611_kidney | 32 .43 RPM |
| SRP017611_liver | 7 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000013811 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002651 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1369 | 83.76 | 53.26 | Please wait, loading  |
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Download FASTA sequences of all ENSOCUG00000014348 retrocopies