Parental gene:

ENSOCUG00000015213

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:15:50289668..50302041(+)


>ENSOCUG00000015213
ATGTCATCTGAAATGTCACCAGCATTTATCGAGACTTCTAATGTTGAAAGAAAGGAAGACTTAGGTGAAGGTCAAGAGGA
GAGCCAGAAGCCAGAAGGTGAAGGGGTTGAACCAATATCTAAACGACAAATGAAGAAGCTAATAAAACAGAAACAGTGGG
AGGAACAACGAGAACTCCGCAAACAAAAGCGGAAAGAAAAACGCAAGAGAAAAAAATTAGAGCGACAATGTCAACTGGAC
TCAAACTCAGATGGAAATGACAGAAAACGTGTGCGAAGACATGCTGTTCACAGCACACTCCGCCTTGTCATTGACTGCAG
TTTTGATGACTTGATGGTATTAAAGGATATTAAAAAACTTCATAAGCAGATTCAACGATGTTATGCAGAAAACCGACGTG
CACTGCATCCTGTGCAGTTTTACTTGACAAGCCATGGAGGCCAGCTGAAAAAGAATATGGATGAAAGTGACAAAGGATGG
GTCAACTGGAAGGATATCAACATCAAATCAGAGCACTATACTGAACTCATTAAAAAAGAAGACTTGATTTATCTGACATC
AGACTCACCTAATGTCCTGGAGGAATTAGATGAATCAAAGGCTTATGTGATTGGAGGATTAGTAGATCACAACCATCACA
AGGGAATCACATATAAACAAGCATCAGATTATGGAATTGACCACGCACAGCTTCCCCTTGGAAATTTTGTGAAGATGAAT
AGTAGAAAAGTTTTGGCTGTTAATCATGTGTTTGAGATTATTCTGGAATACCTAGAAAGAAGAGATTGGCAAGAAGCATT
TTGCACCATTTTACCCCAACGGAAAGGAGCTGTTCCTACAGACAGAACCTGTGAAAGTTCTCGGGAAGAGCAGTCTGCCC
AGGCTGAAGATGGATCAGACAGTGATTCCAGTGAGGGGGAGGACAGCAGAAATGAAGCAGATTCACCACATGCAGAAGAA
AAGCAGGATAAGGAAAACAGCACTGAATCTACAGTGAGTGTGGTATCACACTAA

Library Parental gene expression (RPM)
SRP017611_brain 1 .21 RPM
SRP017611_kidney 2 .23 RPM
SRP017611_liver 0 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001076 possible_ortholog 1 retrogene
retro_amel_1868,
Macaca mulatta ENSMMUG00000009090 possible_ortholog 1 retrogene
retro_mmul_2024,
Mus musculus ENSMUSG00000004127 ortholog_one2many 3 retrogenes
retro_mmus_3007, retro_mmus_3008, retro_mmus_3368,
Oryctolagus cuniculus ENSOCUG00000010994 within_species_paralog 1 retrogene
retro_ocun_671,
Otolemur garnettii ENSOGAG00000005330 ortholog_one2many 2 retrogenes
retro_ogar_2061, retro_ogar_3335,
Ictidomys tridecemlineatus ENSSTOG00000005064 ortholog_one2many 1 retrogene
retro_itri_1131,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1482 91.70 71.22
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Download FASTA sequences of all ENSOCUG00000015213 retrocopies