Parental gene: | ISOC1, ENSOCUG00000017498 |
| Aliases: | None |
| Description: | isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:24254] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:12619797..12641686(+) |
>ENSOCUG00000017498
ATGCTCACCACCCTGGGAAATCTTACACCTTCAAGCACTGTGTTTTTCTGCTGTGATATGCAGGAAAGGTTCAGACCAGC
CATCAAGTATTTTGGGGATATTATTAGTGTTGGACAGAGACTGTTGCAAGGGGCCCGGATTTTAGGAATTCCGGTTATTG
TAACAGAACAGTATCCTAAGGGTCTTGGAAGCACTGTTCAAGAAATTGATTTAACAGGAGTAAAACTGGTTCTTCCCAAG
ACCAAGTTTTCCATGGTGTTACCAGAAGTGGAAGCAGCATTAGCAGAGATTCCTGGAGTCAGGAGTGTTGTACTCTTTGG
AGTGGAAACTCATGTGTGCATCCAGCAGACGGCCCTGGAGCTCGTTGGCCGCGGCATCGAGGTTCATATCGTTGCTGACG
CCACCTCATCGAGGAGCATGATGGACAGGATGTTCGCCCTGGAGCGTCTCGCCCGAACCGGCATCATAGTGACCACGAGC
GAGGCTGTCCTGCTGCAGCTGGTGGCTGATAAAGACCATCCCAAATTCAAGGAGATTCAGAATCTAATTAAGGCGAGTGC
TCCAGAGTCAGGCCTGCTTTCCAAAGTATAG
ATGCTCACCACCCTGGGAAATCTTACACCTTCAAGCACTGTGTTTTTCTGCTGTGATATGCAGGAAAGGTTCAGACCAGC
CATCAAGTATTTTGGGGATATTATTAGTGTTGGACAGAGACTGTTGCAAGGGGCCCGGATTTTAGGAATTCCGGTTATTG
TAACAGAACAGTATCCTAAGGGTCTTGGAAGCACTGTTCAAGAAATTGATTTAACAGGAGTAAAACTGGTTCTTCCCAAG
ACCAAGTTTTCCATGGTGTTACCAGAAGTGGAAGCAGCATTAGCAGAGATTCCTGGAGTCAGGAGTGTTGTACTCTTTGG
AGTGGAAACTCATGTGTGCATCCAGCAGACGGCCCTGGAGCTCGTTGGCCGCGGCATCGAGGTTCATATCGTTGCTGACG
CCACCTCATCGAGGAGCATGATGGACAGGATGTTCGCCCTGGAGCGTCTCGCCCGAACCGGCATCATAGTGACCACGAGC
GAGGCTGTCCTGCTGCAGCTGGTGGCTGATAAAGACCATCCCAAATTCAAGGAGATTCAGAATCTAATTAAGGCGAGTGC
TCCAGAGTCAGGCCTGCTTTCCAAAGTATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 33 .91 RPM |
| SRP017611_kidney | 58 .48 RPM |
| SRP017611_brain | 24 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006851 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000014258 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_449 | 65.64 | 98.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000017498 retrocopies