Parental gene: | TRMT1, ENSOCUG00000021934 |
| Aliases: | None |
| Description: | tRNA methyltransferase 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25980] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL019462:58054..63871(+) |
>ENSOCUG00000021934
TGTCCCATGGGAGGATTGGTGCTGTGGCTGAGTTTCACTCTCCGCTCTGCTCGCAGACTCTGTAGAGCCCGCTTCATGGA
GGGGCATCGCCAAGGGCCGCCGAGTCCAGCCGCGATGGAGAACGGCACCGAGCCCCGCACAGAAGAGCGCCCCCCTGAGG
CCCAGGAAACAACAGTCGCAGAGGGGGCTGCCAGGATCGCCTTCCCCAGCGCCAACGAGGTCTTCTACAACCCCGTACAG
GAGTTCAACCGGGACCTGACGTGCGCTGTGATCACCGAGTTTGCGCGCCTTCAGCTTGGGGCCAAAGGAATCCAAATCAA
GGTACCAGGGGAGAAAGATGTGCAAAAGGTGGTTGTGGACTTATCGGAGCGAGAGGAGGAAAAGACCGAACCGGAAGACG
GCGAAAACCTGGCCCCAGGAGACCAACCTCGAACGGCTGCTGTGGGGGAGATCTGTGAGGGAGGCCTACGGGTACTCGAG
GGCCTTGCCGCTTCCGGCTTGCGCTCTATCCGCTTCGCCCGGGAGGTGCCCGGGCTCCAATCGGTGCTTGCCAATGACGC
CTCTGCCCGGGCTGTGGATCTGATTCGCCGGAATGTGCAGCTCAATGATGTGGGCCACCTGGTACAACCCAGCCAGGCAG
ACGCCCGGATGCTGATGTACCAGCACCAGAAAGTGGCAGAGCGGTTTGACGTCATTGACCTGGACCCCTACGGCAGCCCC
GCCTCCTTCCTGGACGCCGCCGTGCAGGCTGTGAGTGAAGGAGGGCTGCTGTGCGTGACCTGCACGGACATGGCGGTGCT
GGCCGGGAACAGCGGCGAGACCTGCTACAGCAAGTACGGGGCCATGGCCCTCAAGAGCCGGGCCTGCCACGAAATGGCCC
TGCGCATCGTGCTGCACAGCCTGGACCTCCGGGCCAACTGCTACCAGCGCTACGTGGTGCCGCTGCTCAGCCTCAGCGCC
GACTTCTACGTGCGCGTGTTCGTGCGCGTGTTCACGGGCCAGGCCAAGGTCAAGGCCTCGGCCAGCAAGCAGGCGCTGGT
GTTCCAGTGTGTGGGGTGCGGGGCCTTCTACCTTCAGCGCCTCGGCAAAGCAGCGGAGGCCCCCGGCGGCCGGAGGGTCA
AGTTCTCTGCAGCTTGCGGACCCCCCGTGGCCCCCGAATGTGAGCACTGTGGGCAGCGACACCAGCTCGGGGGCCCCTTG
TGGGCAGAGCCCATCCACGACCTGGACTTCGTGGGCCGTGTCCTGGAGGCCGTGAGCGCCAACCCCAGCCGCTTCCACAC
CTCGGAGCGGATCCGGGGTGTGCTGAGCGTCGTGAGCGAGGAGCTCCCGGATGTGCCGCTGTACTACACGCTGGACCAGC
TGAGCAGCACGATCCGCTGCAGCACGCCCAGCCTCCTGCAGCTGCGGTCCGCCCTCCTCCACGCTGGCTTCCGAGTCTCG
CTCTCCCACGCCTGTAAGAACGCCGTGAAGACAGACGCCCCGGCCTCGGCCGTCTGGGACATCATGCGCTGCTGGGAGAA
GGAGTGCCCGGTGAAACGGGAGCGGCTGTCGGAAACCAGCCCCGCCTGGCGCATTCTCAGCGTGGAGCCC
TGTCCCATGGGAGGATTGGTGCTGTGGCTGAGTTTCACTCTCCGCTCTGCTCGCAGACTCTGTAGAGCCCGCTTCATGGA
GGGGCATCGCCAAGGGCCGCCGAGTCCAGCCGCGATGGAGAACGGCACCGAGCCCCGCACAGAAGAGCGCCCCCCTGAGG
CCCAGGAAACAACAGTCGCAGAGGGGGCTGCCAGGATCGCCTTCCCCAGCGCCAACGAGGTCTTCTACAACCCCGTACAG
GAGTTCAACCGGGACCTGACGTGCGCTGTGATCACCGAGTTTGCGCGCCTTCAGCTTGGGGCCAAAGGAATCCAAATCAA
GGTACCAGGGGAGAAAGATGTGCAAAAGGTGGTTGTGGACTTATCGGAGCGAGAGGAGGAAAAGACCGAACCGGAAGACG
GCGAAAACCTGGCCCCAGGAGACCAACCTCGAACGGCTGCTGTGGGGGAGATCTGTGAGGGAGGCCTACGGGTACTCGAG
GGCCTTGCCGCTTCCGGCTTGCGCTCTATCCGCTTCGCCCGGGAGGTGCCCGGGCTCCAATCGGTGCTTGCCAATGACGC
CTCTGCCCGGGCTGTGGATCTGATTCGCCGGAATGTGCAGCTCAATGATGTGGGCCACCTGGTACAACCCAGCCAGGCAG
ACGCCCGGATGCTGATGTACCAGCACCAGAAAGTGGCAGAGCGGTTTGACGTCATTGACCTGGACCCCTACGGCAGCCCC
GCCTCCTTCCTGGACGCCGCCGTGCAGGCTGTGAGTGAAGGAGGGCTGCTGTGCGTGACCTGCACGGACATGGCGGTGCT
GGCCGGGAACAGCGGCGAGACCTGCTACAGCAAGTACGGGGCCATGGCCCTCAAGAGCCGGGCCTGCCACGAAATGGCCC
TGCGCATCGTGCTGCACAGCCTGGACCTCCGGGCCAACTGCTACCAGCGCTACGTGGTGCCGCTGCTCAGCCTCAGCGCC
GACTTCTACGTGCGCGTGTTCGTGCGCGTGTTCACGGGCCAGGCCAAGGTCAAGGCCTCGGCCAGCAAGCAGGCGCTGGT
GTTCCAGTGTGTGGGGTGCGGGGCCTTCTACCTTCAGCGCCTCGGCAAAGCAGCGGAGGCCCCCGGCGGCCGGAGGGTCA
AGTTCTCTGCAGCTTGCGGACCCCCCGTGGCCCCCGAATGTGAGCACTGTGGGCAGCGACACCAGCTCGGGGGCCCCTTG
TGGGCAGAGCCCATCCACGACCTGGACTTCGTGGGCCGTGTCCTGGAGGCCGTGAGCGCCAACCCCAGCCGCTTCCACAC
CTCGGAGCGGATCCGGGGTGTGCTGAGCGTCGTGAGCGAGGAGCTCCCGGATGTGCCGCTGTACTACACGCTGGACCAGC
TGAGCAGCACGATCCGCTGCAGCACGCCCAGCCTCCTGCAGCTGCGGTCCGCCCTCCTCCACGCTGGCTTCCGAGTCTCG
CTCTCCCACGCCTGTAAGAACGCCGTGAAGACAGACGCCCCGGCCTCGGCCGTCTGGGACATCATGCGCTGCTGGGAGAA
GGAGTGCCCGGTGAAACGGGAGCGGCTGTCGGAAACCAGCCCCGCCTGGCGCATTCTCAGCGTGGAGCCC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .63 RPM |
| SRP017611_kidney | 12 .67 RPM |
| SRP017611_brain | 10 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000104907 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009622 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000010557 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1629 | 52.00 | 91.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000021934 retrocopies