Parental gene: | RAB6B, ENSOPRG00000001164 |
| Aliases: | None |
| Description: | RAB6B, member RAS oncogene family [Source:HGNC Symbol;Acc:14902] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_646:98757..137411(-) |
>ENSOPRG00000001164
ATGTCCGCAGGGGGCGATTTTGGAAACCCACTGAGAAAATTCAAGTTGGTGTTCCTGGGGGAGCAGAGCGTCGGGAAGAC
GTCTCTGATCACACGGTTCATGTACGACAGCTTCGACAATACATACCAGGCCACCATAGGGATTGACTTCTTGTCAAAAA
CCATGTACTTGGAGGATCGCACGGTGCGACTGCAGCTCTGGGACACGGCTGGTCAGGAGAGGTTCCGCAGCCTGATCCCC
AGCTACATCCGGGACTCCACAGTGGCAGTGGTGGTGTATGACATCACAAACCTCAACTCCTTCCAGCAGACCTCAAAGTG
GATCGATGACGTGCGGACAGAGCGGGGCAGCGATGTGATCATCATGCTGGTGGGCAACAAGACAGATCTGGCTGACAAGA
GGCAGATAACCATCGAGGAAGGCGAGCAGCGTGCCAAAGAGCTAAGCGTCATGTTCATTGAGACGAGCGCGAAGACCGGC
TACAACGTGAAGCAGCTCTTCCGACGTGTAGCGTCGGCTCTGCCCGGCATGGAGAACGTCCAGGAGAAAAGCAAAGAAGG
GATGATTGACATCAAGCTGGACAAACCCCAGGAGCCCCCGGCCAGCGAGGGCGGCTGTTCCTGCTAA
ATGTCCGCAGGGGGCGATTTTGGAAACCCACTGAGAAAATTCAAGTTGGTGTTCCTGGGGGAGCAGAGCGTCGGGAAGAC
GTCTCTGATCACACGGTTCATGTACGACAGCTTCGACAATACATACCAGGCCACCATAGGGATTGACTTCTTGTCAAAAA
CCATGTACTTGGAGGATCGCACGGTGCGACTGCAGCTCTGGGACACGGCTGGTCAGGAGAGGTTCCGCAGCCTGATCCCC
AGCTACATCCGGGACTCCACAGTGGCAGTGGTGGTGTATGACATCACAAACCTCAACTCCTTCCAGCAGACCTCAAAGTG
GATCGATGACGTGCGGACAGAGCGGGGCAGCGATGTGATCATCATGCTGGTGGGCAACAAGACAGATCTGGCTGACAAGA
GGCAGATAACCATCGAGGAAGGCGAGCAGCGTGCCAAAGAGCTAAGCGTCATGTTCATTGAGACGAGCGCGAAGACCGGC
TACAACGTGAAGCAGCTCTTCCGACGTGTAGCGTCGGCTCTGCCCGGCATGGAGAACGTCCAGGAGAAAAGCAAAGAAGG
GATGATTGACATCAAGCTGGACAAACCCCAGGAGCCCCCGGCCAGCGAGGGCGGCTGTTCCTGCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000009412 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000009905 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000031623 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000010355 | within_species_paralog | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000003663 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_20 | 54.72 | 75.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_606 | 57.23 | 75.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_797 | 57.23 | 75.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_993 | 54.72 | 75.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_opri_1098 | 59.56 | 64.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000001164 retrocopies