Parental gene: | RAB6C, ENSOPRG00000010355 |
| Aliases: | None |
| Description: | RAB6C, member RAS oncogene family [Source:HGNC Symbol;Acc:16525] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_93:58002..121725(-) |
>ENSOPRG00000010355
ATGTCCGCGGGCGGAGACTTCGGGAATCCGCTGAGGAAATTCAAGCTGGTGTTCCTGGGGGAGCAGAGCGTTGGGAAGAC
ATCCTTGATCACCAGATTCATGTATGACAGTTTTGACAACACCTATCAGGCAACAATTGGCATTGACTTTTTATCAAAAA
CAATGTATTTGGAGGATCGAACAATCAGGCTGCAGCTGTGGGATACTGCGGGTCAGGAACGTTTCCGTAGCCTCATTCCC
AGTTACATCCGTGATTCTGCTGCAGCCGTAGTAGTTTACGATATTACAAATGTTAATTCATTCCAGCAAACTACAAAATG
GATTGATGATGTCAGAACAGAAAGAGGAAGTGATGTTATCATCATGCTAGTAGGAAATAAAACAGATCTTGCTGACAAGA
GGCAAGTGTCAATTGAGGAGGGAGAGAGGAAAGCCAAAGAGCTGAATGTCATGTTTATTGAAACTAGTGCGAAAGCAGGA
TATAATGTAAAGCAGCTCTTCCGACGTGTGGCAGCAGCTTTGCCTGGAATGGAAAGCACGCAGGACAGAAGCAGAGAAGA
CATGATT
ATGTCCGCGGGCGGAGACTTCGGGAATCCGCTGAGGAAATTCAAGCTGGTGTTCCTGGGGGAGCAGAGCGTTGGGAAGAC
ATCCTTGATCACCAGATTCATGTATGACAGTTTTGACAACACCTATCAGGCAACAATTGGCATTGACTTTTTATCAAAAA
CAATGTATTTGGAGGATCGAACAATCAGGCTGCAGCTGTGGGATACTGCGGGTCAGGAACGTTTCCGTAGCCTCATTCCC
AGTTACATCCGTGATTCTGCTGCAGCCGTAGTAGTTTACGATATTACAAATGTTAATTCATTCCAGCAAACTACAAAATG
GATTGATGATGTCAGAACAGAAAGAGGAAGTGATGTTATCATCATGCTAGTAGGAAATAAAACAGATCTTGCTGACAAGA
GGCAAGTGTCAATTGAGGAGGGAGAGAGGAAAGCCAAAGAGCTGAATGTCATGTTTATTGAAACTAGTGCGAAAGCAGGA
TATAATGTAAAGCAGCTCTTCCGACGTGTGGCAGCAGCTTTGCCTGGAATGGAAAGCACGCAGGACAGAAGCAGAGAAGA
CATGATT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000175582 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017098 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000001164 | within_species_paralog | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000003663 | possible_ortholog | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000023497 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_247 | 68.42 | 68.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_858 | 68.42 | 68.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_1082 | 68.42 | 68.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_1085 | 65.71 | 73.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_opri_1095 | 67.27 | 57.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_opri_1118 | 64.29 | 73.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000010355 retrocopies