Parental gene: | ACTA1, ENSOPRG00000002854 |
| Aliases: | None |
| Description: | actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_43778:3669..5369(-) |
>ENSOPRG00000002854
ATGTGCGACGAAGACGAGACCACCGCTCTTGTGTGCGACAATGGCTCTGGCCTGGTGAAAGCCGGCTTCGCCGGCGACGA
CGCCCCTAGGGCCGTGTTCCCATCCATCGTGGGCCGCCCCCGTCACCAGGGCGTCATGGTGGGTATGGGTCAGAAAGATT
CCTACGTGGGCGACGAGGCTCAGAGCAAGAGAGGTATCCTGACCCTGAAATACCCTATCGAGCACGGCATCATCACCAAC
TGGGACGACATGGAGAAAATCTGGCACCACACCTTCTACAACGAGCTCCGCGTGGCCCCCGAGGAGCACCCCACCCTACT
CACCGAGGCACCCCTCAACCCTAAGGCCAACCGCGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACGTGCCGGCTA
TGTACGTGGCCATCCAGGCCGTGCTGTCCCTGTACGCCTCCGGCCGGACAACTGGTATCGTGTTGGACTCCGGGGACGGC
GTCACCCACAACGTGCCCATCTATGAGGGTTACGCGCTGCCTCACGCCATCATGCGTCTTGACCTGGCTGGCCGCGACCT
CACTGACTACCTGATGAAGATCCTCACCGAGCGTGGCTACTCCTTCGTGACCACAGCTGAGCGCGAGATCGTGCGTGACA
TCAAGGAGAAGCTGTGCTACGTGGCCTTGGACTTCGAGAATGAGATGGCCACGGCCGCCTCCTCCTCCTCCCTGGAGAAG
AGCTATGAGTTGCCTGATGGGCAGGTCATCACCATTGGCAACGAGCGTTTCCGCTGCCCGGAGACCCTCTTCCAGCCCTC
CTTCATCGGCATGGAGTCGGCAGGCATCCATGAGACCACCTACAACAGCATCATGAAGTGTGACATCGACATCAGGAAGG
ATCTGTACGCTAACAACGTCATGTCTGGGGGCACCACCATGTACCCTGGGATCGCTGACCGTATGCAGAAGGAAATCACC
GCGCTGGCCCCCAGCACCATGAAGATTAAGATCATCGCCCCCCCGGAGCGCAAGTACTCCGTGTGGATCGGCGGCTCCAT
CCTGGCCTCGCTGTCCACCTTCCAGCAGATGTGGATCACCAAGCAGGAGTACGACGAGGCCGGGCCCTCTATCGTGCACC
GTAAATGCTTCTAG
ATGTGCGACGAAGACGAGACCACCGCTCTTGTGTGCGACAATGGCTCTGGCCTGGTGAAAGCCGGCTTCGCCGGCGACGA
CGCCCCTAGGGCCGTGTTCCCATCCATCGTGGGCCGCCCCCGTCACCAGGGCGTCATGGTGGGTATGGGTCAGAAAGATT
CCTACGTGGGCGACGAGGCTCAGAGCAAGAGAGGTATCCTGACCCTGAAATACCCTATCGAGCACGGCATCATCACCAAC
TGGGACGACATGGAGAAAATCTGGCACCACACCTTCTACAACGAGCTCCGCGTGGCCCCCGAGGAGCACCCCACCCTACT
CACCGAGGCACCCCTCAACCCTAAGGCCAACCGCGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACGTGCCGGCTA
TGTACGTGGCCATCCAGGCCGTGCTGTCCCTGTACGCCTCCGGCCGGACAACTGGTATCGTGTTGGACTCCGGGGACGGC
GTCACCCACAACGTGCCCATCTATGAGGGTTACGCGCTGCCTCACGCCATCATGCGTCTTGACCTGGCTGGCCGCGACCT
CACTGACTACCTGATGAAGATCCTCACCGAGCGTGGCTACTCCTTCGTGACCACAGCTGAGCGCGAGATCGTGCGTGACA
TCAAGGAGAAGCTGTGCTACGTGGCCTTGGACTTCGAGAATGAGATGGCCACGGCCGCCTCCTCCTCCTCCCTGGAGAAG
AGCTATGAGTTGCCTGATGGGCAGGTCATCACCATTGGCAACGAGCGTTTCCGCTGCCCGGAGACCCTCTTCCAGCCCTC
CTTCATCGGCATGGAGTCGGCAGGCATCCATGAGACCACCTACAACAGCATCATGAAGTGTGACATCGACATCAGGAAGG
ATCTGTACGCTAACAACGTCATGTCTGGGGGCACCACCATGTACCCTGGGATCGCTGACCGTATGCAGAAGGAAATCACC
GCGCTGGCCCCCAGCACCATGAAGATTAAGATCATCGCCCCCCCGGAGCGCAAGTACTCCGTGTGGATCGGCGGCTCCAT
CCTGGCCTCGCTGTCCACCTTCCAGCAGATGTGGATCACCAAGCAGGAGTACGACGAGGCCGGGCCCTCTATCGTGCACC
GTAAATGCTTCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000014347 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000021417 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_573 | 87.73 | 99.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000002854 retrocopies