Parental gene: | YBX2, ENSOPRG00000013773 |
| Aliases: | None |
| Description: | Y box binding protein 2 [Source:HGNC Symbol;Acc:17948] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_154:57824..62706(-) |
>ENSOPRG00000013773
CCGGCGACGGCAGCCTCGGGGACCCCCGCGCCCCCGGCCCGGAGTCAGGCGGACAAGCCGGTGCTGGCAATTCAGGTCCT
GGGCACCGTCAAATGGTTCAACGTCCGGAATGGTTATGGATTCATCAACAGGAATGACACCAAGGAGGATGTCTTTGTTC
ACCAGACAGCTATCAAGAGAAACAACCCCAGGAAGTTTCTGCGCAGCGTTGGAGACGGGGAGACGGTGGAGTTTGATGTC
GTGGAAGGAGAGAAGGGTGCTGAAGCTGCTAATGTAACTGGGCCTGGGGGTGTGTCCGTGAAGGGCAGCCGCTATGCTCT
CAATCGACGCTCGTTCCGTCGATTCATTCTCCGGCCTCGCTCAGCTGCCTCATCACTCATGGTGACAGAGGCCTCATCAG
TGGGGCAGAATCTTGGCAGTGAAGGGGAGCGGGCTGAAGACTCAGGGCAGCGGCTCCGCCGGCGCCCGCCGCCCTTTTTC
TACCGCCGGCGGTTTGTGCGAGGCCCACGGCCCCCCAACCAGCAGCAGTCCATAGAGGCTACTGACGGGGTGGAGCCCAA
AGACACAGCCCCACTGGAGGGAGACCAACAGCAGGGAGATGAGCGGGTCCCCCCACCAAGATTCCGGCCCAGGTATCGCA
GGCCTTTCCGCCCAAGGCCACCCCAGCAGCCAACCACAGAAGGTGGAGATGGTGAGACCAAGCCCAGCCAAGGCCCCACT
GACGGCTCCCGGCCCGAGCCCCAGCGCCCACGAAACCGCCCCTACTTCCAGCGGCGCCGGCAACAGCCCCCCGGCCCTCG
GCAGCCCACAGTGCCAGAGACCTCAGCCCCCATCAACAGTGGGGACACCCCCCCTACCATGCTGGAGTGA
CCGGCGACGGCAGCCTCGGGGACCCCCGCGCCCCCGGCCCGGAGTCAGGCGGACAAGCCGGTGCTGGCAATTCAGGTCCT
GGGCACCGTCAAATGGTTCAACGTCCGGAATGGTTATGGATTCATCAACAGGAATGACACCAAGGAGGATGTCTTTGTTC
ACCAGACAGCTATCAAGAGAAACAACCCCAGGAAGTTTCTGCGCAGCGTTGGAGACGGGGAGACGGTGGAGTTTGATGTC
GTGGAAGGAGAGAAGGGTGCTGAAGCTGCTAATGTAACTGGGCCTGGGGGTGTGTCCGTGAAGGGCAGCCGCTATGCTCT
CAATCGACGCTCGTTCCGTCGATTCATTCTCCGGCCTCGCTCAGCTGCCTCATCACTCATGGTGACAGAGGCCTCATCAG
TGGGGCAGAATCTTGGCAGTGAAGGGGAGCGGGCTGAAGACTCAGGGCAGCGGCTCCGCCGGCGCCCGCCGCCCTTTTTC
TACCGCCGGCGGTTTGTGCGAGGCCCACGGCCCCCCAACCAGCAGCAGTCCATAGAGGCTACTGACGGGGTGGAGCCCAA
AGACACAGCCCCACTGGAGGGAGACCAACAGCAGGGAGATGAGCGGGTCCCCCCACCAAGATTCCGGCCCAGGTATCGCA
GGCCTTTCCGCCCAAGGCCACCCCAGCAGCCAACCACAGAAGGTGGAGATGGTGAGACCAAGCCCAGCCAAGGCCCCACT
GACGGCTCCCGGCCCGAGCCCCAGCGCCCACGAAACCGCCCCTACTTCCAGCGGCGCCGGCAACAGCCCCCCGGCCCTCG
GCAGCCCACAGTGCCAGAGACCTCAGCCCCCATCAACAGTGGGGACACCCCCCCTACCATGCTGGAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000014006 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000008050 | within_species_paralog | 11 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_326 | 53.01 | 56.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_327 | 53.42 | 54.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_534 | 53.42 | 54.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_760 | 53.01 | 56.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_opri_824 | 93.47 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000013773 retrocopies