Parental gene:

NFU1, ENSOPRG00000016760

Aliases:None
Description:NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16287]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_3921:20930..43168(-)


>ENSOPRG00000016760
ATGGCGGCGGCGGCCCGGTGGGTCTGGGGAGCTGCGGCTGCTGCCGCGGGGCTGCGCGGTCGGTTACATCATATGATGAT
AAATCCATACACCATTAAGAAACAGCCTTTGCATCAGTTTGTTCGAAAATCTCTTTCCCCACTACCTACAGCCTTATGTA
ATAACACAGTGAGATACATGTTTATTCAAACACAAGATACCCCAAATCCCAACAGTTTAAAGTTTATACCAGGAAAGCCA
GTTCTTGAGACAAGGACCATGGACTTTCCTACGCCAGCTTCAGCGTTTCGCTCCCCTCTGGCTAGGCAGTTGTTTCGAAT
CGAAGGAGTAAAAAGTGTGTTCTTTGGGCCAGATTTCATCACTGTTACAAAGGATAATGAAGAATTAGACTGGAATTTAC
TGAAACCAGATATTTATGCAACTATCATGGATTTCTTTGCATCTGGCTTACCCCTGGTTACTGAAGAAACGTCCTCAGGA
GAAGCAGTTTCCGAAGAAGATGATGAAGTTGTGGCAATGATTAAAGAATTATTAGATACTAGAATACGGCCGACTGTGCA
GGAAGATGGCGGAGATGTCATCTTCAAAGGCTTTGAAGATGGCATTGTACAGCTCAAACTCCAAGGCTCTTGTACTNNNN
NNNCCAGCTCTATCATTACTTTGAAGAATGGAATTCAGAACATGCTGCAGTTTTATATTCCAGAAGTGGAAGGTGTAGAA
CAGGTTATGGGTGATGAATCAGATGAAAAAGAAGAAAACTCTTCTTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005978 ortholog_one2one 1 retrogene
retro_chof_456,
Callithrix jacchus ENSCJAG00000019156 ortholog_one2one 1 retrogene
retro_cjac_1573,
Echinops telfairi ENSETEG00000019002 ortholog_one2one 1 retrogene
retro_etel_1371,
Homo sapiens ENSG00000169599 ortholog_one2one 1 retrogene
retro_hsap_2638,
Macaca mulatta ENSMMUG00000000435 ortholog_one2one 1 retrogene
retro_mmul_1524,
Monodelphis domestica ENSMODG00000011805 ortholog_one2one 1 retrogene
retro_mdom_1395,
Mustela putorius furo ENSMPUG00000006663 ortholog_one2many 1 retrogene
retro_mputfur_67,
Mus musculus ENSMUSG00000029993 ortholog_one2one 1 retrogene
retro_mmus_1401,
Nomascus leucogenys ENSNLEG00000010101 ortholog_one2one 1 retrogene
retro_nleu_646,
Pongo abelii ENSPPYG00000012339 ortholog_one2one 1 retrogene
retro_pabe_2329,
Pan troglodytes ENSPTRG00000012016 ortholog_one2one 1 retrogene
retro_ptro_1778,
Tupaia belangeri ENSTBEG00000008616 ortholog_one2one 1 retrogene
retro_tbel_525,
Tarsius syrichta ENSTSYG00000013765 ortholog_one2one 1 retrogene
retro_tsyr_108,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_48 68.24 57.25
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2. retro_opri_380 68.24 57.25
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Download FASTA sequences of all ENSOPRG00000016760 retrocopies