Parental gene:

NUDC, ENSPPYG00000001673

Aliases:None
Description:nuclear distribution C homolog (A. nidulans) [Source:HGNC Symbol;Acc:8045]
Organism:Orangutan (Pongo abelii)
Coordinates:1:203425793..203451263(-)


>ENSPPYG00000001673
ATGGGCGGAGAGCAGGAGGAGGAGCGGTTCGACGGCATGTTGCTGGCCATGGCTCAGCAGCACGAGGGCGGCGTGCAGGA
GCTTGTGAACACCTTCTTCAGCTTCCTTCGACGCAAAACAGACTTTTTCATTGGAGGAGAAGAAGGGATGGCAGAGAAGC
TTATCACACAGACTTTCAGCCACCACAATCAGCTGGCACAGAAGACCCGGTGGGAGAAGAGAGCCCGGCAGGAGGCCGAG
CGGCGGGAGAAGGCGGAGCGGGCGGCCAGACTGGCCAAGGAAGCGAAGTCAGAGACCTCAGGGCCCCAGATCAAGGAGCT
AACTGATGAAGAGGCAGAGAGGCTGCAGCTAGAGATTGACCAGAAAAAGGATGCAGAGAATCATGAGGCCCAGCTCAAGA
ACGGCAGCCTTGACTCCCCAGGGAAGCAGGAGACTGAGGAAGATGAGGAGGAGGAAGATGAGAAGGACAAAGGAAAACTG
AAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAGACCCTGTCGGAGCTGGACCTGGCAGTCCC
TTTCCGTGTGAACTTCCGGCTGAAAGGGAAGGACGTGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGG
GGCAGCCAGCGATCATCGATGGGGAGCTCTACAACGAAGTGAAGGTGGAGGAGAGCTCGTGGCTCATTGAAGACGGCAAG
GTGGTGACTGTGCATCTGGAGAAGATCAATAAGATGGAGTGGTGGAGCCGCTTGGTGTCCAGTGACCCTGAGATCAACAC
CAAGAAGATTAACCCCGAGAATTCCAAGCTGTCAGACCTAGACAGTGAGACTCGCAGCATGGTGGAAAAGATGATGTATG
ACCAGCGACAGAAGTCCATGGGGCTGCCAACTTCAGACGAACAGAAGAAACAGGAGATTCTGAAGAAGTTCATGGATCAG
CATCCGGAGATGGATTTTTCCAAGGCTAAATTCAACTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 265 .17 RPM
SRP007412_cerebellum 137 .53 RPM
SRP007412_heart 69 .96 RPM
SRP007412_kidney 155 .56 RPM
SRP007412_liver 115 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000001291 ortholog_one2one 1 retrogene
retro_eeur_526,
Homo sapiens ENSG00000090273 ortholog_one2one 2 retrogenes
retro_hsap_2168, retro_hsap_2183,
Gorilla gorilla ENSGGOG00000015314 ortholog_one2one 2 retrogenes
retro_ggor_1720, retro_ggor_1730,
Microcebus murinus ENSMICG00000015671 ortholog_one2one 1 retrogene
retro_mmur_457,
Mus musculus ENSMUSG00000028851 ortholog_one2one 1 retrogene
retro_mmus_3181,
Nomascus leucogenys ENSNLEG00000009404 ortholog_one2one 2 retrogenes
retro_nleu_2545, retro_nleu_312,
Pan troglodytes ENSPTRG00000000395 ortholog_one2one 2 retrogenes
retro_ptro_1655, retro_ptro_1661,
Pteropus vampyrus ENSPVAG00000004408 ortholog_one2one 1 retrogene
retro_pvam_434,
Rattus norvegicus ENSRNOG00000007399 ortholog_one2many 2 retrogenes
retro_rnor_2009, retro_rnor_2108,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2055 79.77 78.31
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2. retro_pabe_2064 84.06 62.35
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Download FASTA sequences of all ENSPPYG00000001673 retrocopies