Parental gene:

RAB3IL1, ENSPPYG00000003175

Aliases:None
Description:RAB3A interacting protein (rabin3)-like 1 [Source:HGNC Symbol;Acc:9780]
Organism:Orangutan (Pongo abelii)
Coordinates:11:14356387..14377446(+)


>ENSPPYG00000003175
ATGTGGAGCGGCCCACCCCAGCCAGACCAGGGCCTCCCGCCGCCCCTTGCAGCTGTCCCGGTCCCCTGGAAGAGCACGGA
CCCCTGCCAAAGCCACAGGGAGTTCCCAGGAGCCCTGGTGGAGACTTCTGCAGGGGAGGAGGCCCAAGGCCAGGAGGGCC
CTGCAGCTGCCCAGCTGGATGTGTTGCGCCTGCGCAGCTCTTCCATGGAGATCCGAGAGAAGGGCTCTGAGTTCCTGAAG
GAGGAGCTGCACAGAGCGCAGAAGGAGCTGAAGCTAAAGGATGAGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCT
AGAACAGGAGCTGGAAGAGCTGACGGCCAGCCTGTTCGAGGAAGCTCACAAGATGGTTCGAGAAGCCAACATGAAGCAGG
CGGCATCAGAAAAGCAGCTGAAGGAGGCTCGGGGCAAGATCGACATGCTGCAGGCAGAGGTGACAGCCTTGAAGACGCTG
GTCATCACGTCCACACCAGCCTCTCCCAACCGCGAGCTTCACCCCCAGCTGCTGAGCCCCACCAAGGCCGGGCCCCGAAA
GGGCCACTCTCGCCACAAGAGCACCAGCAGCACCCTCTGCCCCGCCGTGTGTCCCGCTGCGGGACACACCCTCACCCCAG
ACAGAGAGGGCAAGGAGGTGGACACAGTCCTGTTTGCAGAGTTCCAGGCCTGGAGGTCCCCCACCCTGGACAAGACCTGC
CCCTTCCTGGAAAGGGTGTACCGGGAGGACGTGGGCCCCTGCCTGGACTTCACGATGCAGGAGCTCTCGGTGCTGGTACG
GGCCGCCGTGGAGGACAACACGCTCACCATTGAGCCGGTGGCTTCGCAGACGCTGCCCGCAGTGAAGGTGGCCGAGGTTG
ACTGCAGCAGCACCAACACATGTGCCCTGAGCGGGCTGACCCGCACCTGCCGCCACCGAATCCGGCTCGGGGACTCCAAA
AGCCACTACTACATCTCGCCATCTTCCCGGGCCAGGATCACCGCAGTGTGCAACTTCTTCACCTACATCCGCTACATCCA
GCAAGGCCTGGTGCGGCAGGACGCAGAGCCCATGTTCTGGGAGATCATGAGGCTACGGAAGGAGATGTCACTGGCCAAGC
TCGGCTTCTTCCCCCAGGAGGCTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .44 RPM
SRP007412_cerebellum 2 .19 RPM
SRP007412_heart 4 .03 RPM
SRP007412_kidney 57 .34 RPM
SRP007412_liver 11 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000007376 ortholog_one2one 1 retrogene
retro_fcat_348,
Homo sapiens ENSG00000167994 ortholog_one2one 1 retrogene
retro_hsap_3716,
Gorilla gorilla ENSGGOG00000012399 ortholog_one2one 1 retrogene
retro_ggor_2513,
Macaca mulatta ENSMMUG00000015148 ortholog_one2one 1 retrogene
retro_mmul_1698,
Nomascus leucogenys ENSNLEG00000003273 ortholog_one2one 1 retrogene
retro_nleu_2858,
Pan troglodytes ENSPTRG00000003755 ortholog_one2one 1 retrogene
retro_ptro_2518,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3140 63.90 80.58
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Download FASTA sequences of all ENSPPYG00000003175 retrocopies