Parental gene: | YBX3, ENSPPYG00000004279 |
| Aliases: | None |
| Description: | Y box binding protein 3 [Source:HGNC Symbol;Acc:2428] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:11003889..11028711(-) |
>ENSPPYG00000004279
ATGAGCGAGGCGGGCGAGGCCACCACCACCACCACCACCCTCCCGCAGGCTCCGACGGAGGCGGCCGCCGCGGCTCCCCA
GGACCCCGCGCCCAAGAGCCCGGTGGGCAGCGGTGCGCCCCAGGCCGCGGCCCCGGCGCCCGCCGCCCACGTCGCAGGAA
ACCCCGGTGGAGACGCGGCCCCCGCAGCCACGGGCACCGCGGCCGCCGCCTCTTTAGCCACCGCCGCCGGCAGCGAAGAC
GCGGAGAAAAAAGTTCTCGCCACCAAAGTCCTTGGCACTGTCAAATGGTTCAACGTCAGAAATGGATATGGATTTATAAA
TCGAAATGACACCAAAGAAGATGTATTTGTACATCAGACTGCCATCAAGAAGAATAACCCACGGAAATATCTGCGTAGTG
TAGGAGATGGAGAAACTGTAGAGTTTGATGTGGTTGAAGGAGAGAAGGGTGCAGAAGCTGCCAATGTGACTGGCCCGGAT
GGAGTTCCTGTGGAAGGGAGTCGTTACGCTGCAGATCGGCGCCGTTACAGACGTGGCTACTATGGAAGGCGCCGTGGCCC
ACCCCGGAATTACGCTGGGGAGGAGGAGGAGGAAGGGAGCGGCAGCAGTGAAGGATTTGACCCCCCTGCCACTGATAGGC
AGTTCTCTGGGGCCCGGAATCAGCTGCGCCGCCCCCAGTATCGCCCTCAGTACCGGCAGCGGCGGTTCCCGCCTTACCAC
GTGGGACAGACCTTTGACCGTCGCTCACGGGTCTTACCCCATCCCAACAGAATACAGGCTGGTGAGATTGGAGAGATGAA
GGATGGAGTCCCGGAGGGAGCACAACTTCAGGGACCGGTTCATCGAAATCCAACTTACCGCCCAAGGTACCGTAGCAGGG
GACCTCCTCGCCCACGACCTGCCCCAGCAGTTGGAGAGGCTGAAGATAAAGAAAATCAGCAAGCCACCAGTGGTCCAAAC
CAGCAGTCTGTTCGCCGTGGATACCGGCGTCCCTACAATTACCGGCGTCGCCCGCGTCCTCCTAACGCTCCTTCACAAGA
TGGCAAAGAGGCCAAGGCAGGTGAAGCACCAACTGAGAACCCTGCTCCACCCACCCAGCAGAGCAGTGCTGAGTAA
ATGAGCGAGGCGGGCGAGGCCACCACCACCACCACCACCCTCCCGCAGGCTCCGACGGAGGCGGCCGCCGCGGCTCCCCA
GGACCCCGCGCCCAAGAGCCCGGTGGGCAGCGGTGCGCCCCAGGCCGCGGCCCCGGCGCCCGCCGCCCACGTCGCAGGAA
ACCCCGGTGGAGACGCGGCCCCCGCAGCCACGGGCACCGCGGCCGCCGCCTCTTTAGCCACCGCCGCCGGCAGCGAAGAC
GCGGAGAAAAAAGTTCTCGCCACCAAAGTCCTTGGCACTGTCAAATGGTTCAACGTCAGAAATGGATATGGATTTATAAA
TCGAAATGACACCAAAGAAGATGTATTTGTACATCAGACTGCCATCAAGAAGAATAACCCACGGAAATATCTGCGTAGTG
TAGGAGATGGAGAAACTGTAGAGTTTGATGTGGTTGAAGGAGAGAAGGGTGCAGAAGCTGCCAATGTGACTGGCCCGGAT
GGAGTTCCTGTGGAAGGGAGTCGTTACGCTGCAGATCGGCGCCGTTACAGACGTGGCTACTATGGAAGGCGCCGTGGCCC
ACCCCGGAATTACGCTGGGGAGGAGGAGGAGGAAGGGAGCGGCAGCAGTGAAGGATTTGACCCCCCTGCCACTGATAGGC
AGTTCTCTGGGGCCCGGAATCAGCTGCGCCGCCCCCAGTATCGCCCTCAGTACCGGCAGCGGCGGTTCCCGCCTTACCAC
GTGGGACAGACCTTTGACCGTCGCTCACGGGTCTTACCCCATCCCAACAGAATACAGGCTGGTGAGATTGGAGAGATGAA
GGATGGAGTCCCGGAGGGAGCACAACTTCAGGGACCGGTTCATCGAAATCCAACTTACCGCCCAAGGTACCGTAGCAGGG
GACCTCCTCGCCCACGACCTGCCCCAGCAGTTGGAGAGGCTGAAGATAAAGAAAATCAGCAAGCCACCAGTGGTCCAAAC
CAGCAGTCTGTTCGCCGTGGATACCGGCGTCCCTACAATTACCGGCGTCGCCCGCGTCCTCCTAACGCTCCTTCACAAGA
TGGCAAAGAGGCCAAGGCAGGTGAAGCACCAACTGAGAACCCTGCTCCACCCACCCAGCAGAGCAGTGCTGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .37 RPM |
| SRP007412_cerebellum | 6 .57 RPM |
| SRP007412_heart | 172 .46 RPM |
| SRP007412_kidney | 82 .04 RPM |
| SRP007412_liver | 84 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000060138 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001466 | within_species_paralog | 7 retrogenes | |
| Tupaia belangeri | ENSTBEG00000012570 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1420 | 88.17 | 99.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000004279 retrocopies