Parental gene:

FGFR1OP2, ENSPPYG00000004375

Aliases:None
Description:FGFR1 oncogene partner 2 [Source:HGNC Symbol;Acc:23098]
Organism:Orangutan (Pongo abelii)
Coordinates:12:28009317..28029905(+)


>ENSPPYG00000004375
ATGTATACATCGTTAGAAATGAGTTGCACAATTGAGAAGGCACTTGCTGATGCTAAAGCTCTTGTTGAAAGATTAAGAGA
TCATGACGATGCAGCAGAATCTCTGATTGAGCAAACCACAGCTCTCAACAAGCGAGTAGAAGCCATGAAACAGTATCAGG
AAGAAATTCAAGAACTTAATGAAGTTGCGAGACATCGGCCACGGTCCACGTTAGTTATGGGAATCCAGCAAGAAAACAGA
CAAATCAGAGAATTGCAACAAGAAAACAAAGAATTGCGTACATCTCTGGAAGAACATCAGTCGGCCTTGGAACTTATAAT
GAGCAAGTATCGAGAACAAATGTTTAGATTGCTAATGGCTAGCAAAAAGGATGATCCGGGTATAATAATGAAGTTAAAAG
AGCAGCACTCCAAGATTGACATGGTACATCGTAACAAGTCCGAAGGATTCTTCCTTGATGCATCTCGACACATCCTTGAA
GCACCTCAACATGGACTGGAGAGAAGGCACTTGGAAGCAAATCAGAATGAACTGCAAGCACATGTTGACCAGATAACTGA
AATGGCAGCAGTAATGAGGAAAGCCATTGAAATTGACGAGCAACAGGGTTGCAAGGAACAAGAACGAATATTTCAACTCG
AACAAGAAAACAAAGGCTTGAGAGAGATCCTTCAAATAACTCGAGAATCATTTTTGAACCTAAGGAAAGATGATGCGTCG
GAAAGTACTTCTTTGTCAGCATTAGTGACCAACAGTGATTTGAGTCTAAGGAAGAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 23 .44 RPM
SRP007412_cerebellum 20 .67 RPM
SRP007412_heart 9 .96 RPM
SRP007412_kidney 11 .04 RPM
SRP007412_liver 8 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000006966 ortholog_one2one 2 retrogenes
retro_dnov_2342, retro_dnov_2594,
Equus caballus ENSECAG00000016890 ortholog_one2one 1 retrogene
retro_ecab_988,
Homo sapiens ENSG00000111790 ortholog_one2one 1 retrogene
retro_hsap_994,
Loxodonta africana ENSLAFG00000012476 ortholog_one2one 1 retrogene
retro_lafr_486,
Monodelphis domestica ENSMODG00000016618 ortholog_one2many 2 retrogenes
retro_mdom_1788, retro_mdom_244,
Mus musculus ENSMUSG00000040242 ortholog_one2one 2 retrogenes
retro_mmus_3669, retro_mmus_720,
Pan troglodytes ENSPTRG00000004783 ortholog_one2one 1 retrogene
retro_ptro_756,
Tupaia belangeri ENSTBEG00000011581 ortholog_one2one 2 retrogenes
retro_tbel_3732, retro_tbel_4608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_839 85.82 54.05
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Download FASTA sequences of all ENSPPYG00000004375 retrocopies