Parental gene:

CBX5, ENSPPYG00000004599

Aliases:None
Description:chromobox homolog 5 [Source:HGNC Symbol;Acc:1555]
Organism:Orangutan (Pongo abelii)
Coordinates:12:54022335..54042750(-)


>ENSPPYG00000004599
ATGGGAAAGAAAACCAAGCGGACAGCTGACAGTTCTTCTTCAGAGGATGAGGAGGAGTACGTTGTGGAGAAGGTGCTAGA
CAGGCGCGTGGTTAAGGGACAAGTGGAATATCTACTGAAGTGGAAAGGCTTTTCTGAGGAGCACAATACTTGGGAACCTG
AGAAAAACTTGGATTGCCCTGAGCTAATTTCTGAATTTATGAAAAAGTATAAGAAGATGAAGGAGGGTGAAAATAATAAA
CCCAGAGAGAAGTCAGAAAGTAACAAGAGGAAATCCAGTTTCTCAAACAGTGCCGATGATATCAAATCTAAAAAAAAGAG
AGAGCAGAGCAATGATATCGCTCGGGGCTTTGAGAGAGGACTGGAACCAGAAAAGATCATTGGGGCAACAGATTCCTGTG
GTGATTTAATGTTCCTAATGAAATGGAAAGACACAGATGAAGCTGACCTGGTTCTTGCAAAAGAAGCTAATGTGAAATGT
CCACAAATTGTGATAGCATTTTATGAAGAGAGACTGACATGGCATGCATATCCTGAGGATGCGGAAAACAAAGAGAAAGA
AACAGCAAAGAGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .84 RPM
SRP007412_cerebellum 9 .61 RPM
SRP007412_heart 7 .38 RPM
SRP007412_kidney 9 .28 RPM
SRP007412_liver 3 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018847 ortholog_one2one 1 retrogene
retro_cjac_2020,
Echinops telfairi ENSETEG00000001220 ortholog_one2one 1 retrogene
retro_etel_678,
Homo sapiens ENSG00000094916 ortholog_one2one 1 retrogene
retro_hsap_2811,
Gorilla gorilla ENSGGOG00000000041 ortholog_one2one 1 retrogene
retro_ggor_1955,
Nomascus leucogenys ENSNLEG00000017671 ortholog_one2one 1 retrogene
retro_nleu_428,
Pongo abelii ENSPPYG00000008891 within_species_paralog 1 retrogene
retro_pabe_78,
Pongo abelii ENSPPYG00000017714 within_species_paralog 10 retrogenes
retro_pabe_2112, retro_pabe_2243, retro_pabe_2724, retro_pabe_2770, retro_pabe_2997, retro_pabe_3608, retro_pabe_758, retro_pabe_786, retro_pabe_892, retro_pabe_951,
Pan troglodytes ENSPTRG00000005034 ortholog_one2one 1 retrogene
retro_ptro_1905,
Tursiops truncatus ENSTTRG00000004524 ortholog_one2one 1 retrogene
retro_ttru_1859,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2307 70.34 75.39
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000004599 retrocopies