Parental gene:

CBX5, ENSPTRG00000005034

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:34942231..34998379(+)


>ENSPTRG00000005034
ATGGGAAAGAAAACCAAGCGGACAGCTGACAGTTCTTCTTCAGAGGATGAGGAGGAGTATGTTGTGGAGAAGGTGCTAGA
CAGGCGCGTGGTTAAGGGACAAGTGGAATATCTACTGAAGTGGAAAGGCTTTTCTGAGGAGCACAATACTTGGGAACCTG
AGAAAAACTTGGATTGCCCTGAGCTAATTTCTGAATTTATGAAAAAGTATAAGAAGATGAAGGAGGGTGAAAATAACAAA
CCCAGGGAGAAGTCAGAAAGTAACAAGAGGAAATCCAATTTCTCAAACAGTGCCGATGACATCAAATCTAAAAAAAAGAG
AGAGCAGAGCAATGATATCGCTCGGGGCTTTGAGAGAGGACTGGAACCAGAAAAGATCATTGGGGCAACAGATTCCTGTG
GTGATTTAATGTTCCTAATGAAATGGAAAGACACAGATGAAGCTGACCTGGTTCTTGCAAAAGAAGCTAATGTGAAATGT
CCACAAATTGTGATAGCATTTTATGAAGAGAGACTGACATGGCATGCGTATCCTGAGGATGCGGAAAACAAAGAGAAAGA
AACAGCAAAGAGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 11 .24 RPM
SRP007412_cerebellum 28 .89 RPM
SRP007412_heart 18 .33 RPM
SRP007412_kidney 13 .18 RPM
SRP007412_liver 6 .09 RPM
SRP007412_testis 121 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018847 ortholog_one2one 1 retrogene
retro_cjac_2020,
Echinops telfairi ENSETEG00000001220 ortholog_one2one 1 retrogene
retro_etel_678,
Homo sapiens ENSG00000094916 ortholog_one2one 1 retrogene
retro_hsap_2811,
Gorilla gorilla ENSGGOG00000000041 ortholog_one2one 1 retrogene
retro_ggor_1955,
Nomascus leucogenys ENSNLEG00000017671 ortholog_one2one 1 retrogene
retro_nleu_428,
Pongo abelii ENSPPYG00000004599 ortholog_one2one 1 retrogene
retro_pabe_2307,
Pan troglodytes ENSPTRG00000019003 within_species_paralog 10 retrogenes
retro_ptro_17, retro_ptro_1706, retro_ptro_1875, retro_ptro_2289, retro_ptro_2475, retro_ptro_395, retro_ptro_537, retro_ptro_630, retro_ptro_729, retro_ptro_780,
Tursiops truncatus ENSTTRG00000004524 ortholog_one2one 1 retrogene
retro_ttru_1859,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1905 70.34 75.39
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Download FASTA sequences of all ENSPTRG00000005034 retrocopies