Parental gene: | NDUFAF1, ENSPPYG00000006373 |
| Aliases: | None |
| Description: | NADH dehydrogenase (ubiquinone) complex I, assembly factor 1 [Source:HGNC Symbol;Acc:18828] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 15:37816411..37832773(-) |
>ENSPPYG00000006373
ATGGCTTTGGTTCACAAATTGCTGCGTGGTACTTATATTCTCAGAAAATTCTCTAAGCCAGCTTCTGCCTTGTATCCATT
TTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGTCTTCAGAAACCAGTGGCTTCTCCTGGCAAAGCCTCCTCACAGAGGA
AGACCGAAGGGGATTTGCAGGGAGATCACCAGAAAGAAGTTGCTTTGGATATAACTTCTTCTGAGGAGAAGCCTGATGTT
AGTTTCGATAAAGCAATTAGAGATGAAGCAGCGTACCATTTTAGGCATTTGAAGGATGAAATTGTGGATCATTGGAGAGG
ACCGGAAGGCCGCCCTCTGCGTGAGGTCTTGCTGGAACAAGCCAAGGTTGTCTGGCAGTTCCGGGGGAAAGAAGATTTGG
ATAAGTGGACAGTGACTTCTGATAAGACGATTGGAGGCAGAAGTGAAGTGTTTCTGAAAATGGGCAAGAATAACCAAAGT
GCACTGCTATATGGAACTCTGAGCTCTGAGGCGCCTCACGACGGGGAGTCTACCCGAAGTGGGTACTGTGCAATGATATC
CAGGATTCCAAGGGGTGCTTTTGAGAGGAAGGTGTCTTATGATTGGTCCCAGTTTAATACTCTGTATCTCCGTGTACGTG
GGGATGGTCGGCCTTGGATGGTGAATATCAAGGAGGACACAGATTTCTTCCAGAGGACGAATCAGATGTATAGTTACTTC
ATGTTCACCCGCGGGGGACCCTACTGGCAGGAGGTCAAGATTCCTTTTTCCAAATTTTTCTTCTCTAATCGAGGAAGAAT
CCGAGATGTTCAGCATGAGCTTCCACTTGATAAGATCTCTTCTATAGGATTCACCTTGGCTGATAAAGTGGATGGTCCAT
TCTTCCTGGAGATAGATTTTATTGGCGTGTTTACTGATCCAGCTCATACAGAAGAATTTGCCTATGAAAATTCTCCAGAG
CTTAACCCAAGGCTTTTTAAATAA
ATGGCTTTGGTTCACAAATTGCTGCGTGGTACTTATATTCTCAGAAAATTCTCTAAGCCAGCTTCTGCCTTGTATCCATT
TTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGTCTTCAGAAACCAGTGGCTTCTCCTGGCAAAGCCTCCTCACAGAGGA
AGACCGAAGGGGATTTGCAGGGAGATCACCAGAAAGAAGTTGCTTTGGATATAACTTCTTCTGAGGAGAAGCCTGATGTT
AGTTTCGATAAAGCAATTAGAGATGAAGCAGCGTACCATTTTAGGCATTTGAAGGATGAAATTGTGGATCATTGGAGAGG
ACCGGAAGGCCGCCCTCTGCGTGAGGTCTTGCTGGAACAAGCCAAGGTTGTCTGGCAGTTCCGGGGGAAAGAAGATTTGG
ATAAGTGGACAGTGACTTCTGATAAGACGATTGGAGGCAGAAGTGAAGTGTTTCTGAAAATGGGCAAGAATAACCAAAGT
GCACTGCTATATGGAACTCTGAGCTCTGAGGCGCCTCACGACGGGGAGTCTACCCGAAGTGGGTACTGTGCAATGATATC
CAGGATTCCAAGGGGTGCTTTTGAGAGGAAGGTGTCTTATGATTGGTCCCAGTTTAATACTCTGTATCTCCGTGTACGTG
GGGATGGTCGGCCTTGGATGGTGAATATCAAGGAGGACACAGATTTCTTCCAGAGGACGAATCAGATGTATAGTTACTTC
ATGTTCACCCGCGGGGGACCCTACTGGCAGGAGGTCAAGATTCCTTTTTCCAAATTTTTCTTCTCTAATCGAGGAAGAAT
CCGAGATGTTCAGCATGAGCTTCCACTTGATAAGATCTCTTCTATAGGATTCACCTTGGCTGATAAAGTGGATGGTCCAT
TCTTCCTGGAGATAGATTTTATTGGCGTGTTTACTGATCCAGCTCATACAGAAGAATTTGCCTATGAAAATTCTCCAGAG
CTTAACCCAAGGCTTTTTAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 19 .52 RPM |
| SRP007412_cerebellum | 10 .09 RPM |
| SRP007412_heart | 22 .88 RPM |
| SRP007412_kidney | 34 .17 RPM |
| SRP007412_liver | 21 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000025980 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016845 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003587 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006945 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1683 | 76.77 | 76.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1684 | 73.57 | 99.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000006373 retrocopies