Parental gene: | NDUFAF1, ENSPTRG00000006945 |
| Aliases: | None |
| Description: | Pan troglodytes NADH dehydrogenase (ubiquinone) complex I, assembly factor 1 (NDUFAF1), mRNA. [Source:RefSeq mRNA;Acc:NM_001079923] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 15:38290653..38305955(-) |
>ENSPTRG00000006945
ATGGCTTTGGTTCACAAATTGCTGCGTGGTACTTATTTTCTCAGAAAATTCTCTAAGCCAACTTCTGCCTTGTATCCATT
TTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGTCTTCAGAAACCAGTGGCTTCTCCTGGCAAAGCCTCCTCACAGAGGA
AGACTGAAGGGGATTTGCAAGGAGATCACCAGAAAGAAGTTGCTTTGGATATAACTTCTTCTGAGGAGAAGCCTGATGTT
AGTTTCGATAAAGCAATTAGAGATGAAGCAATGTACCATTTTAGGCATTTGAAGGATGAAATTGTGGATCATTGGAGAGG
ACCGGAAGGCCACCCTCTGCATGAGGTCTTGCTGGAACAAGCCAAGGTTGTCTGGCAATTCCGGGGGAAAGAAGATTTGG
ATAAGTGGACAGTAACTTCTGATAAGACGATTGGAGGCAGAAGTGAAGTGTTTTTGAAAATGGGCAAGAATAACCAAAGT
GCACTGCTATATGGAACTCTGAGCTCTGAGGCGCCTCAGGACGGGGAGTCTACCCGAAGTGGGTACTGTGCAATGATATC
CAGGATTCCAAGGGGTGCTTTTGAGAGGAAGATGTCTTACGATTGGTCCCAGTTCAATACTCTGTATCTCCGTGTACGTG
GGGATGGTCGGCCTTGGATGGTGAATATCAAGGAGGACACAGATTTCTTCCAGAGGACGAATCAGATGTATAGTTACTTC
ATGTTCACCCGCGGGGGACCCTACTGGCAGGAGGTCAAGATTCCTTTTTCCAAATTTTTCTTCTCTAATCGAGGAAGAAT
CCGGGATGTTCAGCATGAGCTTCCGCTTGATAAGATCTCTTCTATAGGATTCACCTTGGCTGATAAAGTGGATGGTCCAT
TCTTCCTGGAGATAGATTTTATTGGCGTGTTTACTGATCCAGCTCATACAGAAGAATTTGCCTATGAAAATTCTCCAGAG
CTTAACCCAAGGCTTTTTAAATAA
ATGGCTTTGGTTCACAAATTGCTGCGTGGTACTTATTTTCTCAGAAAATTCTCTAAGCCAACTTCTGCCTTGTATCCATT
TTTGGGTATTCGCTTTGCAGAGTATTCCAGTAGTCTTCAGAAACCAGTGGCTTCTCCTGGCAAAGCCTCCTCACAGAGGA
AGACTGAAGGGGATTTGCAAGGAGATCACCAGAAAGAAGTTGCTTTGGATATAACTTCTTCTGAGGAGAAGCCTGATGTT
AGTTTCGATAAAGCAATTAGAGATGAAGCAATGTACCATTTTAGGCATTTGAAGGATGAAATTGTGGATCATTGGAGAGG
ACCGGAAGGCCACCCTCTGCATGAGGTCTTGCTGGAACAAGCCAAGGTTGTCTGGCAATTCCGGGGGAAAGAAGATTTGG
ATAAGTGGACAGTAACTTCTGATAAGACGATTGGAGGCAGAAGTGAAGTGTTTTTGAAAATGGGCAAGAATAACCAAAGT
GCACTGCTATATGGAACTCTGAGCTCTGAGGCGCCTCAGGACGGGGAGTCTACCCGAAGTGGGTACTGTGCAATGATATC
CAGGATTCCAAGGGGTGCTTTTGAGAGGAAGATGTCTTACGATTGGTCCCAGTTCAATACTCTGTATCTCCGTGTACGTG
GGGATGGTCGGCCTTGGATGGTGAATATCAAGGAGGACACAGATTTCTTCCAGAGGACGAATCAGATGTATAGTTACTTC
ATGTTCACCCGCGGGGGACCCTACTGGCAGGAGGTCAAGATTCCTTTTTCCAAATTTTTCTTCTCTAATCGAGGAAGAAT
CCGGGATGTTCAGCATGAGCTTCCGCTTGATAAGATCTCTTCTATAGGATTCACCTTGGCTGATAAAGTGGATGGTCCAT
TCTTCCTGGAGATAGATTTTATTGGCGTGTTTACTGATCCAGCTCATACAGAAGAATTTGCCTATGAAAATTCTCCAGAG
CTTAACCCAAGGCTTTTTAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 22 .04 RPM |
| SRP007412_cerebellum | 25 .13 RPM |
| SRP007412_heart | 61 .29 RPM |
| SRP007412_kidney | 35 .75 RPM |
| SRP007412_liver | 31 .69 RPM |
| SRP007412_testis | 123 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000025980 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016845 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003587 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006373 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1383 | 81.10 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000006945 retrocopies