Parental gene: | MAPK3, ENSPPYG00000007239 |
| Aliases: | None |
| Description: | mitogen-activated protein kinase 3 [Source:HGNC Symbol;Acc:6877] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 16:28150370..28159797(+) |
>ENSPPYG00000007239
ATGGCGGCGGCGGCGGCGGCGGCTCAGGGGGGCGGGGGCGGGGAGCCCCGTAGAACCGAGGGGGTCGGCCCGGGGGTCCC
GGGGGAGGTGGAGATGGTGAAGGGGCAGCCGTTCGACGTGGGCCCGCGCTACACGCAGTTGCAGTACATCGGCGAGGGCG
CGTACGGCATGGTCAGCTCGGCCTATGACCACGTGCGCAAGACTCGCGTGGCCATCAAGAAGATCAGCCCCTTCGAGCAT
CAGACCTACTGCCAGCGCACGCTCCGGGAGATCCAGATCCTGCTGCGCTTCCGCCATGAGAATGTCATCGGCATCCGAGA
CATTCTGCGGGCGTCCACCCTGGAAGCCATGAGGGATGTCTACATTGTGCAGGACCTGATGGAGACTGACCTGTACAAGT
TGCTGAAAAGCCAGCAGCTGAGCAATGACCATATCTGCTACTTCCTCTACCAGATCCTGCGGGGCCTCAAATACATCCAC
TCCGCCAACGTGCTCCACCGAGATCTAAAGCCCTCCAACCTGCTCATCAACACCACCTGCGACCTTAAGATTTGCGATTT
CGGCCTGGCCCGGATTGCCGATCCTGAGCATGACCACACCGGCTTCCTGACGGAGTATGTGGCTACGCGCTGGTACCGGG
CCCCAGAGATCATGCTGAACTCCAAGGGCTATACCAAGTCCATCGACATCTGGTCTGTGGGCTGCATTCTGGCTGAGATG
CTCTCTAACCGGCCCATCTTCCCCGGCAAGCACTACCTGGATCAGCTCAACCACATTCTGGGCATCCTGGGCTCCCCATC
CCAGGAGGACCTGAATTGTATCATCAACATGAAGGCCCGAAACTACCTACAGTCTCTGCCCTCCAAGACCAAGGTGGCTT
GGGCCAAGCTTTTTCCCAAGTCAGACTCCAAAGCCCTTGACCTGCTGGACCGGATGTTAACCTTTAACCCCAATAAACGG
ATCACAGTGGAGGAAGCGCTGGCTCACCCCTACCTGGAGCAGTACTATGACCCGACGGATGAGCCAGTGGCCGAGGAGCC
CTTCACCTTCGCCATGGAGCTGGACGACCTACCTAAGGAGCGGCTGAAGGAGCTCATCTTCCAGGAGACAGCACGCTTCC
AGCCCGGAGTGCTGGAGGCCCCCTAG
ATGGCGGCGGCGGCGGCGGCGGCTCAGGGGGGCGGGGGCGGGGAGCCCCGTAGAACCGAGGGGGTCGGCCCGGGGGTCCC
GGGGGAGGTGGAGATGGTGAAGGGGCAGCCGTTCGACGTGGGCCCGCGCTACACGCAGTTGCAGTACATCGGCGAGGGCG
CGTACGGCATGGTCAGCTCGGCCTATGACCACGTGCGCAAGACTCGCGTGGCCATCAAGAAGATCAGCCCCTTCGAGCAT
CAGACCTACTGCCAGCGCACGCTCCGGGAGATCCAGATCCTGCTGCGCTTCCGCCATGAGAATGTCATCGGCATCCGAGA
CATTCTGCGGGCGTCCACCCTGGAAGCCATGAGGGATGTCTACATTGTGCAGGACCTGATGGAGACTGACCTGTACAAGT
TGCTGAAAAGCCAGCAGCTGAGCAATGACCATATCTGCTACTTCCTCTACCAGATCCTGCGGGGCCTCAAATACATCCAC
TCCGCCAACGTGCTCCACCGAGATCTAAAGCCCTCCAACCTGCTCATCAACACCACCTGCGACCTTAAGATTTGCGATTT
CGGCCTGGCCCGGATTGCCGATCCTGAGCATGACCACACCGGCTTCCTGACGGAGTATGTGGCTACGCGCTGGTACCGGG
CCCCAGAGATCATGCTGAACTCCAAGGGCTATACCAAGTCCATCGACATCTGGTCTGTGGGCTGCATTCTGGCTGAGATG
CTCTCTAACCGGCCCATCTTCCCCGGCAAGCACTACCTGGATCAGCTCAACCACATTCTGGGCATCCTGGGCTCCCCATC
CCAGGAGGACCTGAATTGTATCATCAACATGAAGGCCCGAAACTACCTACAGTCTCTGCCCTCCAAGACCAAGGTGGCTT
GGGCCAAGCTTTTTCCCAAGTCAGACTCCAAAGCCCTTGACCTGCTGGACCGGATGTTAACCTTTAACCCCAATAAACGG
ATCACAGTGGAGGAAGCGCTGGCTCACCCCTACCTGGAGCAGTACTATGACCCGACGGATGAGCCAGTGGCCGAGGAGCC
CTTCACCTTCGCCATGGAGCTGGACGACCTACCTAAGGAGCGGCTGAAGGAGCTCATCTTCCAGGAGACAGCACGCTTCC
AGCCCGGAGTGCTGGAGGCCCCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 174 .55 RPM |
| SRP007412_cerebellum | 40 .37 RPM |
| SRP007412_heart | 9 .63 RPM |
| SRP007412_kidney | 29 .67 RPM |
| SRP007412_liver | 13 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017108 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002191 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000017904 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011284 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006482 | within_species_paralog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000019601 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1440 | 52.55 | 66.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000007239 retrocopies