Parental gene: | RHBDD1, ENSPPYG00000013235 |
| Aliases: | RHBDD1, RRP4 |
| Description: | rhomboid domain-containing protein 1 [Source:RefSeq peptide;Acc:NP_001125444] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2b:118932652..119097355(+) |
>ENSPPYG00000013235
ATGCAACGGAGATCAAGAGGGATAAATACTGGACTTATTCTACTCCTTTCTCAAATCTTTCATGTTGGGATCAACAATAT
TCCACCTGTCACCCTAGCAACTTTGGCCCTCAACATCTGGTTCTTCTTGAACCCTCAGAAGCCACTGTATAGCTCCTGCC
TTAGCGTGGAGAAGTGTTACCAGCAAAGAGACTGGCAGCGTTTACTGCTCTCTCCCCTTCACCATGCTGATGATTGGCAT
TTGTATTTCAATATGGCATCCGTGCTGTGGAAAGGAATAAATCTAGAAAGAAGACTGGGAAGTAGATGGTTTGCCTATGT
TATCACCACATTTTCTGTACTTACTGGAGTGGTATACCTGCTCTTGCAATTTGCTGTTGCCGAATTTATGGATGAACCTG
ACTTCAAAAGGAGCTGTGCTGTAGGTTTCTCAGGAGTTTTGTTTGCTTTGAAAGTTCTTAACAACCACTATTGCCCTGGA
GGCTTTGTCAACATTTTGGGCTTTCCTGTACCGAACAGATTTGCTTGTTGGGTCGAACTTGTGGCTATTCATTTATTCTC
ACCAGGGACTTCCTTCGCTGGGCATCTGGCTGGGATTCTTGTTGGACTAATGTACACTCAAGGGCCTCTGAAGAAAATCA
TGGAAGCATGTGCAGGTTTAGGTGGTTTTTCCTCCAGTGTTGGTTACCCAGGACAGCAATACTACTTTAATAGTTCAGGC
AGCTCTGGATATCAGGATTATTATCCGCATGGCAGGCCGGATCACTATGAAGAAGCACCCAGGAACTATGACACGTACAC
AGCAGGACTGAGTGAAGAAGAACAGCTCGAGAGAGCATTACAAGCCAGCCTCTGGGACCGAGGACATACCAGAAACAGCC
CACCACCCTACGGGTTTCATCTCTCACCAGAAGAAGAAATGAGGAGACAGCGGCTTCACAGATTCGATAGCCAGTGA
ATGCAACGGAGATCAAGAGGGATAAATACTGGACTTATTCTACTCCTTTCTCAAATCTTTCATGTTGGGATCAACAATAT
TCCACCTGTCACCCTAGCAACTTTGGCCCTCAACATCTGGTTCTTCTTGAACCCTCAGAAGCCACTGTATAGCTCCTGCC
TTAGCGTGGAGAAGTGTTACCAGCAAAGAGACTGGCAGCGTTTACTGCTCTCTCCCCTTCACCATGCTGATGATTGGCAT
TTGTATTTCAATATGGCATCCGTGCTGTGGAAAGGAATAAATCTAGAAAGAAGACTGGGAAGTAGATGGTTTGCCTATGT
TATCACCACATTTTCTGTACTTACTGGAGTGGTATACCTGCTCTTGCAATTTGCTGTTGCCGAATTTATGGATGAACCTG
ACTTCAAAAGGAGCTGTGCTGTAGGTTTCTCAGGAGTTTTGTTTGCTTTGAAAGTTCTTAACAACCACTATTGCCCTGGA
GGCTTTGTCAACATTTTGGGCTTTCCTGTACCGAACAGATTTGCTTGTTGGGTCGAACTTGTGGCTATTCATTTATTCTC
ACCAGGGACTTCCTTCGCTGGGCATCTGGCTGGGATTCTTGTTGGACTAATGTACACTCAAGGGCCTCTGAAGAAAATCA
TGGAAGCATGTGCAGGTTTAGGTGGTTTTTCCTCCAGTGTTGGTTACCCAGGACAGCAATACTACTTTAATAGTTCAGGC
AGCTCTGGATATCAGGATTATTATCCGCATGGCAGGCCGGATCACTATGAAGAAGCACCCAGGAACTATGACACGTACAC
AGCAGGACTGAGTGAAGAAGAACAGCTCGAGAGAGCATTACAAGCCAGCCTCTGGGACCGAGGACATACCAGAAACAGCC
CACCACCCTACGGGTTTCATCTCTCACCAGAAGAAGAAATGAGGAGACAGCGGCTTCACAGATTCGATAGCCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .99 RPM |
| SRP007412_cerebellum | 4 .62 RPM |
| SRP007412_heart | 7 .59 RPM |
| SRP007412_kidney | 9 .12 RPM |
| SRP007412_liver | 9 .88 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012767 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000144468 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000723 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012990 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2915 | 60.73 | 59.75 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000013235 retrocopies