Parental gene: | RHBDD1, ENSPTRG00000012990 |
| Aliases: | None |
| Description: | rhomboid domain containing 1 [Source:HGNC Symbol;Acc:23081] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 2B:231993061..232155473(+) |
>ENSPTRG00000012990
ATGCAACGGAGATCAAGAGGGATAAATACTGGACTTATTCTACTCCTTTCTCAAATCTTCCATGTTGGGATCAACAATAT
TCCACCTGTCACCCTAGCAACTTTGGCCCTCAACATCTGGTTCTTCTTGAACCCTCAGAAGCCACTGTATAGCTCCTGCC
TTAGTGTGGAGAAGTGTTACCAGCAAAAAGACTGGCAGCGTTTACTGCTCTCTCCCCTTCACCATGCTGATGATTGGCAT
TTGTATTTCAATATGGCATCCATGCTCTGGAAAGGAATAAATCTAGAAAGAAGACTGGGAAGTAGATGGTTTGCCTATGT
TATCACCACATTTTCTGTACTTACTGGAGTGGTATACCTGCTCTTGCAATTTGCTGTTGCCGAATTTATGGATGAACCTG
ACTTCAAAAGGAGCTGTGCTGTAGGGTTCTCAGGAGTTTTGTTTGCTTTGAAAGTTCTTAACAACCATTATTGCCCTGGA
GGCTTTGTCAACATTTTGGGCTTTCCCGTACCGAACAGATTTGCTTGTTGGGTCGAACTTGTGGCTATTCATTTATTCTC
ACCAGGGACTTCCTTCGCTGGGCATCTGGCTGGGATTCTTGTTGGACTAATGTACACTCAAGGGCCTCTGAAGAAAATCA
TGGAAGCATGTGCAGGCGGTTTTTCCTCCAGTGCTGGTTACCCAGGACGGCAATACTACTTTAATAGTTCAGGCAGCTCT
GGATATCAGGATTATTATCCGCATGGCAGGCCGGATCACTATGAAGAAGCACCCGGGAACTATGACACGTACACAGCAGG
ACTGAGTGAAGAAGAACAGCTCGAGAGAGCATTACAAGCCAGCCTCTGGGACCGAGGAAATACCAGAAATAGCCCACCAC
CCTACGGGTTTCATCTCTCACCAGAAGAAATGAGGAGACAGCGGCTTCACAGATTCGATAGCCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .52 RPM |
| SRP007412_cerebellum | 4 .34 RPM |
| SRP007412_heart | 8 .63 RPM |
| SRP007412_kidney | 16 .34 RPM |
| SRP007412_liver | 15 .35 RPM |
| SRP007412_testis | 44 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012767 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000144468 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000723 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013235 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2397 | 69.84 | 59.37 | Please wait, loading  |
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Download FASTA sequences of all ENSPTRG00000012990 retrocopies