Parental gene:

ARL8B, ENSPPYG00000013694

Aliases:None
Description:ADP-ribosylation factor-like protein 8B [Source:RefSeq peptide;Acc:NP_001126561]
Organism:Orangutan (Pongo abelii)
Coordinates:3:64940595..65001085(-)


>ENSPPYG00000013694
ATGCTGGCGCTCATCTCCCGCCTGGACTGGTTCCGTTCGCTCTTCTGGAAGGAGGAGATGGAGCTGACGCTCGTGGGGCT
GCAGTACTCGGGCAAGACCACCTTCGTCAATGTCATCGCGTCAGGTCAATTCAGTGAAGATATGATACCCACAGTGGGCT
TCAACATGAGGAAGGTAACTAAAGGTAACGTCACAATAAAGATCTGGGACATAGGAGGACAACCCCGATTTCGAAGCATG
TGGGAGCGGTATTGCAGAGGAGTCAATGCTATTGTTTACATGATAGATGCTGCAGATCGTGAAAAGATAGAAGCTTCCCG
AAATGAGCTACATAATCTTCTAGATAAACCACAGTTACAAGGAATTCCAGTGCTAGTGCTTGGAAACAAGAGAGATCTTC
CTAATGCCTTGGATGAGAAACAGCTAATTGAAAAAATGAATCTGTCTGCTATTCAGGATAGAGAAATTTGCTGCTATTCA
ATTTCTTGCAAAGAAAAGGATAATATAGATATCACACTTCAGTGGCTTATTCAGCATTCAAAATCTAGAAGAAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 90 .01 RPM
SRP007412_cerebellum 90 .23 RPM
SRP007412_heart 31 .76 RPM
SRP007412_kidney 36 .13 RPM
SRP007412_liver 25 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007757 ortholog_one2one 2 retrogenes
retro_chof_1196, retro_chof_2630,
Callithrix jacchus ENSCJAG00000015842 ortholog_one2one 2 retrogenes
retro_cjac_1120, retro_cjac_470,
Homo sapiens ENSG00000134108 ortholog_one2one 1 retrogene
retro_hsap_361,
Gallus gallus ENSGALG00000008314 ortholog_one2one 1 retrogene
retro_ggal_25,
Gorilla gorilla ENSGGOG00000004952 ortholog_one2one 1 retrogene
retro_ggor_373,
Microcebus murinus ENSMICG00000000244 ortholog_one2one 2 retrogenes
retro_mmur_1220, retro_mmur_1239,
Mustela putorius furo ENSMPUG00000017035 ortholog_one2one 2 retrogenes
retro_mputfur_1390, retro_mputfur_541,
Oryctolagus cuniculus ENSOCUG00000014090 ortholog_one2one 2 retrogenes
retro_ocun_1942, retro_ocun_751,
Pongo abelii ENSPPYG00000000148 other_paralog 3 retrogenes
retro_pabe_3159, retro_pabe_849, retro_pabe_965,
Pongo abelii ENSPPYG00000004473 other_paralog 1 retrogene
retro_pabe_126,
Pongo abelii ENSPPYG00000013768 other_paralog 3 retrogenes
retro_pabe_1013, retro_pabe_1075, retro_pabe_3451,
Tarsius syrichta ENSTSYG00000001724 ortholog_one2one 1 retrogene
retro_tsyr_2150,
Vicugna pacos ENSVPAG00000012114 ortholog_one2one 2 retrogenes
retro_vpac_495, retro_vpac_519,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_343 87.38 54.59
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Download FASTA sequences of all ENSPPYG00000013694 retrocopies