Parental gene: | WDR48, ENSPPYG00000014001 |
| Aliases: | None |
| Description: | WD repeat-containing protein 48 [Source:UniProtKB/Swiss-Prot;Acc:Q5RAW8] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:107583609..107633465(-) |
>ENSPPYG00000014001
ATGGCGGCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGCAGGTTTCCTATGTTATTCGAGATGAAGTGGAGAA
GTACAACCGAAATGGAGTCAATGCTCTGCAGCTGGATCCAGCACTAAATAGACTTTTCACAGCCGGTCGAGACTCTATCA
TAAGAATATGGAGTGTCAATCAGCACAAGCAAGATCCGTATATAGCATCTATGGAACACCATACTGATTGGGTAAACGAC
ATTGTACTCTGTTGTAATGGGAAAACACTAATATCTGCTTCTTCTGACACGACAGTAAAAGTATGGAATGCACACAAGGG
ATTTTGCATGTCAACATTAAGGACACATAAGGATTACGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCAT
CAGCTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGCCTCAAATAACACTGTCACA
ACTTCTTCTTTAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGGGAACAATCATTGTATCAGGGTC
CACTGAAAAGGTGTTAAGGGTATGGGATCCAAGAACATGTGCAAAACTAATGAAGCTTAAAGGGCACACGGATAATGTGA
AGGCATTGCTATTAAACAGAGATGGCACGCAATGCCTTTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGC
CAGCAGAGATGTATAGCAACATACCGAGTTCATGATGAAGGTGTTTGGGCGTTGCAAGTCAATGATGCCTTCACACATGT
GTATTCTGGTGGAAGGGACAGGAAGATTTATTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAA
AAGCACCAGTTCTCAAGATGGAGCTTGATAGATCAGCTGATCCTCCTCCTGCAATTTGGGTTGCAACAACTAAGTCTACA
GTAAATAAATGGATTTTGAAAGGAATTCATAATTTTAGAGCCTCTGGAGATTATGACAATGACTGTACAAATCCTATAAC
ACCTCTTTGTACACAGCCTGACCAGGTTATTAAAGGGGGTGCTAGTATTATTCAGTGCCACATTCTTAATGATAAGAGAC
ATATATTAACCAAAGATACCAATAATAATGTGGCATATTGGGATGTATTGAAGGCATGTAAAGTTGAAGATCTGGGCAAA
GTGGATTTTGAAGATGAAATTAAGAAAAGATTTAAAATGGTGTATGTGCCAAATTGGTTCTCAGTAGACTTAAAAACAGG
GATGTTAACTATTACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTG
ATGGGTCAGATCCAAAATTGAATTTAGGAGGACTTTTACTCCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAAT
CCAATGGATGAAGAGGAAAATGAAGTAAACCATGTAAATGGGGAGCAGGAGAACCGAGTGCAGAAGGGAAATGGATATTT
TCAAGTGCCCCCCCACACACCCGTGATCTTTGGTGAAGCTGGAGGTCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCG
GGGGTGAGACTGAGTCTATGCTTCTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCC
AAATTCAACAAAATTCCTTTCTACCTCCAACCTCATGCATCTTCAGGAGCAAAAACCTTAAAAAAAGATAGACTCTCTGC
TAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTATGAAAAAATTATCAACTTGGATAATGAGTCTCAAACCA
CTAGCTCTTCTAATAATGAAAAACCAGGAGAACAGGAAAAAGAAGAAGATATTGCTGTGTTGGCAGAGGAGAAAATTGAA
CTTTTGTGCCAGGACCAGGTTTTGGATCCAAATATGGACCTTCGAACAGTGAAACACTTCATATGGAAGAGCGGTGGAGA
CCTCACCCTCCATTACCGTCAGAAGTCCACGTGA
ATGGCGGCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGCAGGTTTCCTATGTTATTCGAGATGAAGTGGAGAA
GTACAACCGAAATGGAGTCAATGCTCTGCAGCTGGATCCAGCACTAAATAGACTTTTCACAGCCGGTCGAGACTCTATCA
TAAGAATATGGAGTGTCAATCAGCACAAGCAAGATCCGTATATAGCATCTATGGAACACCATACTGATTGGGTAAACGAC
ATTGTACTCTGTTGTAATGGGAAAACACTAATATCTGCTTCTTCTGACACGACAGTAAAAGTATGGAATGCACACAAGGG
ATTTTGCATGTCAACATTAAGGACACATAAGGATTACGTAAAGGCCTTAGCATATGCCAAGGATAAAGAACTAGTAGCAT
CAGCTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGCCTCAAATAACACTGTCACA
ACTTCTTCTTTAAGTGGAAACAAAGATTCCATTTATAGCCTGGCCATGAATCAACTGGGAACAATCATTGTATCAGGGTC
CACTGAAAAGGTGTTAAGGGTATGGGATCCAAGAACATGTGCAAAACTAATGAAGCTTAAAGGGCACACGGATAATGTGA
AGGCATTGCTATTAAACAGAGATGGCACGCAATGCCTTTCAGGCAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGC
CAGCAGAGATGTATAGCAACATACCGAGTTCATGATGAAGGTGTTTGGGCGTTGCAAGTCAATGATGCCTTCACACATGT
GTATTCTGGTGGAAGGGACAGGAAGATTTATTGTACAGACCTAAGAAACCCTGACATTCGGGTGCTAATTTGTGAAGAAA
AAGCACCAGTTCTCAAGATGGAGCTTGATAGATCAGCTGATCCTCCTCCTGCAATTTGGGTTGCAACAACTAAGTCTACA
GTAAATAAATGGATTTTGAAAGGAATTCATAATTTTAGAGCCTCTGGAGATTATGACAATGACTGTACAAATCCTATAAC
ACCTCTTTGTACACAGCCTGACCAGGTTATTAAAGGGGGTGCTAGTATTATTCAGTGCCACATTCTTAATGATAAGAGAC
ATATATTAACCAAAGATACCAATAATAATGTGGCATATTGGGATGTATTGAAGGCATGTAAAGTTGAAGATCTGGGCAAA
GTGGATTTTGAAGATGAAATTAAGAAAAGATTTAAAATGGTGTATGTGCCAAATTGGTTCTCAGTAGACTTAAAAACAGG
GATGTTAACTATTACTTTGGATGAAAGTGATTGTTTTGCTGCCTGGGTTTCTGCAAAAGATGCTGGTTTCAGCAGCCCTG
ATGGGTCAGATCCAAAATTGAATTTAGGAGGACTTTTACTCCAAGCACTCCTGGAATATTGGCCTAGAACACATGTGAAT
CCAATGGATGAAGAGGAAAATGAAGTAAACCATGTAAATGGGGAGCAGGAGAACCGAGTGCAGAAGGGAAATGGATATTT
TCAAGTGCCCCCCCACACACCCGTGATCTTTGGTGAAGCTGGAGGTCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCG
GGGGTGAGACTGAGTCTATGCTTCTTAATGAAACAGTGCCACAATGGGTAATTGACATCACTGTGGATAAAAATATGCCC
AAATTCAACAAAATTCCTTTCTACCTCCAACCTCATGCATCTTCAGGAGCAAAAACCTTAAAAAAAGATAGACTCTCTGC
TAGTGACATGCTCCAAGTCCGAAAAGTTATGGAACATGTTTATGAAAAAATTATCAACTTGGATAATGAGTCTCAAACCA
CTAGCTCTTCTAATAATGAAAAACCAGGAGAACAGGAAAAAGAAGAAGATATTGCTGTGTTGGCAGAGGAGAAAATTGAA
CTTTTGTGCCAGGACCAGGTTTTGGATCCAAATATGGACCTTCGAACAGTGAAACACTTCATATGGAAGAGCGGTGGAGA
CCTCACCCTCCATTACCGTCAGAAGTCCACGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 28 .20 RPM |
| SRP007412_cerebellum | 34 .17 RPM |
| SRP007412_heart | 13 .94 RPM |
| SRP007412_kidney | 19 .56 RPM |
| SRP007412_liver | 13 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pongo abelii | ENSPPYG00000007796 | other_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019140 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_320 | 97.47 | 52.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_321 | 97.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000014001 retrocopies