Parental gene: | CALU, ENSPPYG00000017982 |
| Aliases: | None |
| Description: | Calumenin [Source:UniProtKB/Swiss-Prot;Acc:Q5RDD8] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 7:125620250..125654748(+) |
>ENSPPYG00000017982
ATGGACCTGCGACAGTTTCTTATGTGCCTGTCCCTGTGCACAGCGTTTGCCTTGAGCAAGCCCACAGAAAAGAAGGACCG
TGTACATCATGAGCCTCAGCTCAGTGACAAGGTTCACAATGATGCTCAGAGTTTTGATTATGACCATGATGCCTTCTTGG
GTGCTGAAGAAGCAAAGACCTTTGATCAGCTGACACCAGAAGAGAGCAAGGAAAGGCTTGGAATGATTGTAGATAAAATA
GACGCGGATAAAGATGGGTTTGTGACGGAGGGGGAGCTGAAATCCTGGATTAAGCACGCCCAGAAGAAATACATATATGA
CAATGTTGAAAACCAATGGCAGGAGTTTGATATGAATCAAGACGGCTTAATCTCCTGGGATGAGTACAGAAACGTGACTT
ATGGCACTTACCTGGATGATCCAGACCCTGATGATGGATTTAACTATAAACAGATGATGGTTAGAGATGAGCGGAGGTTT
AAAATGGCAGACAAGGATGGAGACCTCATTGCCACAAAGGAGGAGTTCACAGCTTTCCTGCACCCTGAGGAGTATGACTA
CATGAAAGATATAGTAGTGCAGGAAACAATGGAAGATATAGATAAGAATGCTGATGGTTTCATTGATCTAGAAGAGTATA
TTGGTGACATGTACAGCCATGATGGGAATACTGATGAGCCAGAATGGGTAAAGACAGAGCGAGAGCAGTTTGTTGAGTTT
CGGGATAAGAACCGTGATGGGAAGATGGACAAGGAAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCATGCAGA
GGCAGAAGCCAGGCACCTGGTCTATGAATCAGACCAAAACAAGGATGGCAAGCTTACCAAGGAGGAGATCGTTGACAAGT
ACGACTTATTTGTTGGCAGCCAGGCCACAGATTTTGGGGAGGCCTTAGTACGGCATGATGAGTTCTGA
ATGGACCTGCGACAGTTTCTTATGTGCCTGTCCCTGTGCACAGCGTTTGCCTTGAGCAAGCCCACAGAAAAGAAGGACCG
TGTACATCATGAGCCTCAGCTCAGTGACAAGGTTCACAATGATGCTCAGAGTTTTGATTATGACCATGATGCCTTCTTGG
GTGCTGAAGAAGCAAAGACCTTTGATCAGCTGACACCAGAAGAGAGCAAGGAAAGGCTTGGAATGATTGTAGATAAAATA
GACGCGGATAAAGATGGGTTTGTGACGGAGGGGGAGCTGAAATCCTGGATTAAGCACGCCCAGAAGAAATACATATATGA
CAATGTTGAAAACCAATGGCAGGAGTTTGATATGAATCAAGACGGCTTAATCTCCTGGGATGAGTACAGAAACGTGACTT
ATGGCACTTACCTGGATGATCCAGACCCTGATGATGGATTTAACTATAAACAGATGATGGTTAGAGATGAGCGGAGGTTT
AAAATGGCAGACAAGGATGGAGACCTCATTGCCACAAAGGAGGAGTTCACAGCTTTCCTGCACCCTGAGGAGTATGACTA
CATGAAAGATATAGTAGTGCAGGAAACAATGGAAGATATAGATAAGAATGCTGATGGTTTCATTGATCTAGAAGAGTATA
TTGGTGACATGTACAGCCATGATGGGAATACTGATGAGCCAGAATGGGTAAAGACAGAGCGAGAGCAGTTTGTTGAGTTT
CGGGATAAGAACCGTGATGGGAAGATGGACAAGGAAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCATGCAGA
GGCAGAAGCCAGGCACCTGGTCTATGAATCAGACCAAAACAAGGATGGCAAGCTTACCAAGGAGGAGATCGTTGACAAGT
ACGACTTATTTGTTGGCAGCCAGGCCACAGATTTTGGGGAGGCCTTAGTACGGCATGATGAGTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 60 .76 RPM |
| SRP007412_cerebellum | 38 .06 RPM |
| SRP007412_heart | 146 .06 RPM |
| SRP007412_kidney | 39 .15 RPM |
| SRP007412_liver | 59 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000010477 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003385 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019668 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_211 | 96.51 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000017982 retrocopies