Parental gene: | AGPAT5, ENSPPYG00000018320 |
| Aliases: | None |
| Description: | 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon [Source:RefSeq peptide;Acc:NP_001124637] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 8:6987370..7039607(+) |
>ENSPPYG00000018320
ATGGTGCTCTTCTTCTTCGAGAATTACACCGGGGTCCAGATATTGCTATATGGAGATTTGCCAAAAAATAAAGAAAATAT
AATATATTTAGCAAATCATCAAAGCACAGTTGACTGGATTGTTGCTGACATCTTGGCCATCAGGCAGAATGCGCTAGGAC
ATGTGCGCTACGTGCTGAAAGAAGGGTTAAAATGGCTGCCATTGTATGGGTGTTATTTTGCTCAGCATGGAGGAATCTAT
GTAAAGCGCAGTGCCAAATTTAACGAGAAAGAGATGCGAAACAAGTTGCAGAGCTACGTGGACACAGGAACTCCAATGTA
TCTTGTGATTTTTCCAGAAGGTACAAGGTATAATCCAGAGCAAACAAAAGTCCTTTCAGCTAGTCAGGCATTTGCTGCCC
AACGTGGCCTTGCAGTATTAAAACATGTGCTAACACCACGAATAAAGGCAACTCACGTTGCTTTTGATTGCATGAAGAAT
TATTTAGATGCAATTTATGATGTTACGGTGGTTTATGAAGGGAAGGACGATGGAGGGCAGCGAAGAGAGTCACCGACCAT
GACGGAATTTCTCTGCAAAGAATGTCCAAAAATTCATATTCACATTGATCGTATCGACAAAAAAGATGTCCCAGAAGAAC
AAGAACATATGAGAAGATGGCTGCATGAACGTTTCGAAATCAAAGATAAGATGCTTATAGAATTTTATGAGTCACCAGAT
CCAGAAAGAAGAAAAAGATTTCCTGGGAAAAGTGTTAATTCCAAATTAAGTATCAAGAAGACTTTACCATCAATGTTGAT
CTTAAGTGGTTTGACTGCAGGCATGCTTATGACCGATGCTGGAAGGAAGCTGTATGTGAACACATGGATATATGGAACCC
TACTTGGCTGCCTGTGGGTTACTATTAAAGCATAA
ATGGTGCTCTTCTTCTTCGAGAATTACACCGGGGTCCAGATATTGCTATATGGAGATTTGCCAAAAAATAAAGAAAATAT
AATATATTTAGCAAATCATCAAAGCACAGTTGACTGGATTGTTGCTGACATCTTGGCCATCAGGCAGAATGCGCTAGGAC
ATGTGCGCTACGTGCTGAAAGAAGGGTTAAAATGGCTGCCATTGTATGGGTGTTATTTTGCTCAGCATGGAGGAATCTAT
GTAAAGCGCAGTGCCAAATTTAACGAGAAAGAGATGCGAAACAAGTTGCAGAGCTACGTGGACACAGGAACTCCAATGTA
TCTTGTGATTTTTCCAGAAGGTACAAGGTATAATCCAGAGCAAACAAAAGTCCTTTCAGCTAGTCAGGCATTTGCTGCCC
AACGTGGCCTTGCAGTATTAAAACATGTGCTAACACCACGAATAAAGGCAACTCACGTTGCTTTTGATTGCATGAAGAAT
TATTTAGATGCAATTTATGATGTTACGGTGGTTTATGAAGGGAAGGACGATGGAGGGCAGCGAAGAGAGTCACCGACCAT
GACGGAATTTCTCTGCAAAGAATGTCCAAAAATTCATATTCACATTGATCGTATCGACAAAAAAGATGTCCCAGAAGAAC
AAGAACATATGAGAAGATGGCTGCATGAACGTTTCGAAATCAAAGATAAGATGCTTATAGAATTTTATGAGTCACCAGAT
CCAGAAAGAAGAAAAAGATTTCCTGGGAAAAGTGTTAATTCCAAATTAAGTATCAAGAAGACTTTACCATCAATGTTGAT
CTTAAGTGGTTTGACTGCAGGCATGCTTATGACCGATGCTGGAAGGAAGCTGTATGTGAACACATGGATATATGGAACCC
TACTTGGCTGCCTGTGGGTTACTATTAAAGCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 25 .99 RPM |
| SRP007412_cerebellum | 26 .39 RPM |
| SRP007412_heart | 6 .11 RPM |
| SRP007412_kidney | 20 .29 RPM |
| SRP007412_liver | 11 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005142 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000004979 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008958 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000000051 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013084 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3671 | 51.00 | 65.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018320 retrocopies