Parental gene: | ENSPPYG00000018452 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 8:25216035..25246597(-) |
>ENSPPYG00000018452
ATGAGGCGGGTGACCCTGTTCCTGAACGGCAGCCCCAAGAACGGAAAGGTGGTTGCTGTATATGGAACTTTATCTGATTT
GCTTTCTGTGGCCAGCAGTAAACTCGGCATAAAAGCCACCAGTGTGTATAATGGGAAAGGTGGACTGATTGATGATATTG
CTTTGATCAGGGATGATGATGTTTTGTTTGTTTGTGAAGGAGAGCCATTTATTGATCCTCAGACAGATTCTAAGCCTCCT
GAAGGACTGTTAGGATTCCACACAGACTGGCTGACATTAAATGTTGGAGGGCGGTACTTTACAACTACACGGAGCACTTT
AGTGAATAAAGAACCTGACAGTATGCTGGCCCACATGTTTAAGGACAAAGGTGTCTGGGGAAATAAGCAAGATCACAGAG
GAGCTTTCTTAATTGACCGAAGTCCTGAGTACTTTGAACCCATTTTGAACTACTTGCGTCATGGACAGCTCATTGTAAAT
GATGGCATTAATTTATTGGGTGTGTTAGAAGAAGCAAGATTTTTTGGTATTGACTCATTGATTGAACACCTAGAAGTGGC
AATAAAGAATTCTCAACCACCGGAGGATCATTCACCAATATCCCGAAAGGAATTTGTCCGATTTTTGCTAGCAACTCCAA
CCAAGTCAGAACTGCGATGCCAGGGTTTGAACTTCAGTGGTGCTGATCTTTCTCGTTTGGACCTTCGATACATTAACTTC
AAAATGGCCAATTTAAGCCGCTGTAATCTTGCACATGCAAATCTTTGCTGTGCAAATCTTGAACGAGCTGATCTCTCTGG
ATCAGTGCTTGACTGTGCAAATCTCCAGGGAGTCAAGATGCTCTGTTCTAATGCAGAAGGAGCATCCCTGAAACTGTGTA
ATTTTGAGGATCCTTCTGGTCTTAAAGCCAATTTAGAAGGTGCTAATCTGAAAGGTGTGGATATGGAAGGAAGTCAGATG
ACAGGAATTAACCTGAGAGTGGCTACCTTAAAAAATGCAAAGTTGAAGAACTGTAACCTCAGAGGAGCAACTCTGGCAGG
AACTGATTTAGAGAATTGTGATCTGTCTGGGTGTGATCTTCAAGAAGCCAACCTGAGAGGGTCCAACGTGAAGGGAGCTA
TATTTGAAGAGATGCTGACACCACTACACATGTCACAAAGTGTCAGATGA
ATGAGGCGGGTGACCCTGTTCCTGAACGGCAGCCCCAAGAACGGAAAGGTGGTTGCTGTATATGGAACTTTATCTGATTT
GCTTTCTGTGGCCAGCAGTAAACTCGGCATAAAAGCCACCAGTGTGTATAATGGGAAAGGTGGACTGATTGATGATATTG
CTTTGATCAGGGATGATGATGTTTTGTTTGTTTGTGAAGGAGAGCCATTTATTGATCCTCAGACAGATTCTAAGCCTCCT
GAAGGACTGTTAGGATTCCACACAGACTGGCTGACATTAAATGTTGGAGGGCGGTACTTTACAACTACACGGAGCACTTT
AGTGAATAAAGAACCTGACAGTATGCTGGCCCACATGTTTAAGGACAAAGGTGTCTGGGGAAATAAGCAAGATCACAGAG
GAGCTTTCTTAATTGACCGAAGTCCTGAGTACTTTGAACCCATTTTGAACTACTTGCGTCATGGACAGCTCATTGTAAAT
GATGGCATTAATTTATTGGGTGTGTTAGAAGAAGCAAGATTTTTTGGTATTGACTCATTGATTGAACACCTAGAAGTGGC
AATAAAGAATTCTCAACCACCGGAGGATCATTCACCAATATCCCGAAAGGAATTTGTCCGATTTTTGCTAGCAACTCCAA
CCAAGTCAGAACTGCGATGCCAGGGTTTGAACTTCAGTGGTGCTGATCTTTCTCGTTTGGACCTTCGATACATTAACTTC
AAAATGGCCAATTTAAGCCGCTGTAATCTTGCACATGCAAATCTTTGCTGTGCAAATCTTGAACGAGCTGATCTCTCTGG
ATCAGTGCTTGACTGTGCAAATCTCCAGGGAGTCAAGATGCTCTGTTCTAATGCAGAAGGAGCATCCCTGAAACTGTGTA
ATTTTGAGGATCCTTCTGGTCTTAAAGCCAATTTAGAAGGTGCTAATCTGAAAGGTGTGGATATGGAAGGAAGTCAGATG
ACAGGAATTAACCTGAGAGTGGCTACCTTAAAAAATGCAAAGTTGAAGAACTGTAACCTCAGAGGAGCAACTCTGGCAGG
AACTGATTTAGAGAATTGTGATCTGTCTGGGTGTGATCTTCAAGAAGCCAACCTGAGAGGGTCCAACGTGAAGGGAGCTA
TATTTGAAGAGATGCTGACACCACTACACATGTCACAAAGTGTCAGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .58 RPM |
| SRP007412_cerebellum | 11 .19 RPM |
| SRP007412_heart | 14 .33 RPM |
| SRP007412_kidney | 10 .61 RPM |
| SRP007412_liver | 5 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012157 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004480 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000010151 | ortholog_one2many | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000016156 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000008616 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1527 | 89.26 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2725 | 93.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3457 | 91.19 | 99.23 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018452 retrocopies