Parental gene: | ATG4A, ENSPPYG00000020619 |
| Aliases: | ATG4A, APG4A |
| Description: | cysteine protease ATG4A [Source:RefSeq peptide;Acc:NP_001126588] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | X:107090654..107154487(+) |
>ENSPPYG00000020619
ATGGAGTCAGTTTTATCCAAGTATGAAAACCAGATTACTATTTTCACTGACTACCTAGAAGAATATCCAGATACAGATGA
GCTGGTATGGATCTTAGGGAAGCAGCATCTCCTTAAAACAGAAAAATCTAAGCTGTTGTCTGATATAAGTGCTCGTCTAT
GGTTTACATACAGAAGGAAATTTTCACCAATTGGTGGAACGGGCCCTTCATCAGATGCTGGTTGGGGATGTATGCTACGC
TGTGGACAGATGATGCTGGCTCAAGCCCTTATCTGTAGACACTTGGGAAGGGACTGGAGCTGGGAGAAACAAAAAGAACA
ACCCAAAGAATACCAACGCATCCTACAGTGCTTCTTAGATAGAAAAGATTGTTGCTACTCTATCCATCAAATGGCACAAA
TGGGTGTAGGAGAAGGGAAATCAATTGGAGAATGGTTTGGACCAAATACAGTTGCACAGGTGTTAAAAAAACTTGCTTTA
TTTGACGAATGGAATTCCTTGGCTGTTTATGTTTCAATGGATAACACAGTGGTCATTGAAGATATCAAAAAAATGTGCCG
TGTCCTTCCCTTGAGTGCTGACACAGCTGGTGACAGGCCTCCCGATTCTTTGACTGCTTCAAACCTGAGTAAGGGCACCT
CTGCCTACTGCTCAGCCTGGAAACCCCTGCTGCTCATTGTGCCCCTTCGCCTGGGCATAAACCAAATCAATCCTGTCTAT
GTTGATGCATTCAAAGAGTGTTTTAAGATGCCACAGTCTTTAGGGGCATTAGGAGGAAAACCAAATAACGCGTATTATTT
CATAGGATTCTTAGGTGACGAGCTCATCTTCTTGGACCCTCACACAACCCAGACCTTTGTCGACACTGAAGAGAATGGAA
CGGTTAATGACCAGACTTTCCATTGCCTGCAGTCCCCACAGCGAATGAACATCCTGAACCTGGATCCTTCAGTTGCATTG
GGATTTTTCTGCAAAGAAGAAAAAGACTTTGATAACTGGTGTAGCCTTGTTCAGAAGGAAATTCTAAAGGAGAATTTAAG
GATGTTTGAATTAGTTCAGAAACATCCATCACACTGGCCTCCCTTTGTACCTCCAGCCAAGCCAGAAGTGACAACCACTG
GGGCAGAATTCATTGACTCTACTGAGCAACTGGAGGAGTTTGATCTGGAGGAAGATTTTGAGATTCTGAGTGTGTAG
ATGGAGTCAGTTTTATCCAAGTATGAAAACCAGATTACTATTTTCACTGACTACCTAGAAGAATATCCAGATACAGATGA
GCTGGTATGGATCTTAGGGAAGCAGCATCTCCTTAAAACAGAAAAATCTAAGCTGTTGTCTGATATAAGTGCTCGTCTAT
GGTTTACATACAGAAGGAAATTTTCACCAATTGGTGGAACGGGCCCTTCATCAGATGCTGGTTGGGGATGTATGCTACGC
TGTGGACAGATGATGCTGGCTCAAGCCCTTATCTGTAGACACTTGGGAAGGGACTGGAGCTGGGAGAAACAAAAAGAACA
ACCCAAAGAATACCAACGCATCCTACAGTGCTTCTTAGATAGAAAAGATTGTTGCTACTCTATCCATCAAATGGCACAAA
TGGGTGTAGGAGAAGGGAAATCAATTGGAGAATGGTTTGGACCAAATACAGTTGCACAGGTGTTAAAAAAACTTGCTTTA
TTTGACGAATGGAATTCCTTGGCTGTTTATGTTTCAATGGATAACACAGTGGTCATTGAAGATATCAAAAAAATGTGCCG
TGTCCTTCCCTTGAGTGCTGACACAGCTGGTGACAGGCCTCCCGATTCTTTGACTGCTTCAAACCTGAGTAAGGGCACCT
CTGCCTACTGCTCAGCCTGGAAACCCCTGCTGCTCATTGTGCCCCTTCGCCTGGGCATAAACCAAATCAATCCTGTCTAT
GTTGATGCATTCAAAGAGTGTTTTAAGATGCCACAGTCTTTAGGGGCATTAGGAGGAAAACCAAATAACGCGTATTATTT
CATAGGATTCTTAGGTGACGAGCTCATCTTCTTGGACCCTCACACAACCCAGACCTTTGTCGACACTGAAGAGAATGGAA
CGGTTAATGACCAGACTTTCCATTGCCTGCAGTCCCCACAGCGAATGAACATCCTGAACCTGGATCCTTCAGTTGCATTG
GGATTTTTCTGCAAAGAAGAAAAAGACTTTGATAACTGGTGTAGCCTTGTTCAGAAGGAAATTCTAAAGGAGAATTTAAG
GATGTTTGAATTAGTTCAGAAACATCCATCACACTGGCCTCCCTTTGTACCTCCAGCCAAGCCAGAAGTGACAACCACTG
GGGCAGAATTCATTGACTCTACTGAGCAACTGGAGGAGTTTGATCTGGAGGAAGATTTTGAGATTCTGAGTGTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .53 RPM |
| SRP007412_cerebellum | 9 .97 RPM |
| SRP007412_heart | 7 .80 RPM |
| SRP007412_kidney | 11 .67 RPM |
| SRP007412_liver | 11 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000002971 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000079418 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014016 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022170 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3666 | 80.48 | 62.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000020619 retrocopies