Parental gene:

PEF1, ENSPTRG00000000463

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:31750307..31765645(-)


>ENSPTRG00000000463
ATGGCCAGCTATCCTTACCGGCAGGGCTGCCCAGGAGCTGCAGGACAAGCACCAGGAGCCCCTCCGGGTAGCTACTACCC
TGGACCCCCCAATAGTGGAGGGCAGTATGGTAGTGGGCTACCCCCTGGTGGTGGTTATGGGGGTCCTGCCCCTGGAGGGC
CTTATGGACCACCAGCTGGTGGAGGGCCCTATGGACACCCCAATCCTGGGATGTTCCCCTCTGGAACTCCAGGAGGACCA
TATGGCGGTGCAGCTCCGGGGGGCCCCTATGGTCAGCCACCTCCAAGTTCCTACGGTGCCCAGCAGCCTGGGCTTTATGG
ACAGGGTGGCGCCCCTCCCAATGTGGATCCTGAGGCCTACTCCTGGTTCCAGTCGGTGGACTCAGATCACAGTGGCTATA
TCTCCATGAAGGAGCTAAAGCAGGCCCTGGTCAACTGCAATTGGTCTTCATTCAATGATGAGACCTGCCTCATGATGATA
AACATGTTTGACAAGACCAAGTCAGGCCGCATCGATGTCTACGGCTTCTCAGCCCTGTGGAAATTCATCCAGCAGTGGAA
GAACCTCTTCCAGCAGTATGACCGGGACCGCTCGGGCTCCATTAGCTACACAGAGCTGCAGCAAGCTCTGTCCCAAATGG
GCTACAACCTGAGCCCCCAGTTCACCCAGCTTCTGGTCTCCCGCTACTGCCCACGCTCTGCCAATCCTGCCATGCAGCTT
GACCGCTTCATCCAGGTGTGCACCCAGCTGCAGGTGCTGACAGAGGCCTTCCGGGAGAAGGACACAGCTGTACAAGGCAA
CATTCGGCTCAGCTTCGAGGACTTCGTCACCATGACAGCTTCTCGGATGCTATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 53 .48 RPM
SRP007412_cerebellum 32 .08 RPM
SRP007412_heart 21 .04 RPM
SRP007412_kidney 61 .93 RPM
SRP007412_liver 45 .70 RPM
SRP007412_testis 36 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006355 ortholog_one2one 1 retrogene
retro_cjac_1745,
Homo sapiens ENSG00000162517 ortholog_one2one 1 retrogene
retro_hsap_497,
Gorilla gorilla ENSGGOG00000015897 ortholog_one2one 1 retrogene
retro_ggor_464,
Macropus eugenii ENSMEUG00000014458 ortholog_one2one 1 retrogene
retro_meug_375,
Microcebus murinus ENSMICG00000001374 ortholog_one2one 1 retrogene
retro_mmur_937,
Macaca mulatta ENSMMUG00000023397 ortholog_one2many 1 retrogene
retro_mmul_146,
Monodelphis domestica ENSMODG00000017573 ortholog_one2one 1 retrogene
retro_mdom_1930,
Nomascus leucogenys ENSNLEG00000001979 ortholog_one2one 1 retrogene
retro_nleu_2422,
Oryctolagus cuniculus ENSOCUG00000005744 ortholog_one2one 1 retrogene
retro_ocun_461,
Pongo abelii ENSPPYG00000001611 ortholog_one2one 1 retrogene
retro_pabe_238,
Rattus norvegicus ENSRNOG00000013972 ortholog_one2one 2 retrogenes
retro_rnor_1563, retro_rnor_2505,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_375 79.79 99.65
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Download FASTA sequences of all ENSPTRG00000000463 retrocopies