Parental gene:

RFWD2, ENSPTRG00000001711

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:154450650..154722557(-)


>ENSPTRG00000001711
ATGTCTGGTAGCCGCCAGGCCGGGTCGGGCTCCGCTGGGACAAGCCCCGGCTCCTCGGCGGCCTCCTCGGTGACTTCCGC
CTCCTCGTCTTTATCCTCTTCCCCGTCGCCGCCTTCCGTGGCGGTTTCGGCGGCAGCGCTGGTGTCCGGCGGGGTGGCCC
AGGCCGCCGGCTCGGGCGGCCTCGGGGGCCCGGTGCGGCCTGTGTTGGTGGCGCCCGCCGTATCGGGCAGCGGCGGCGGG
GCGGTGTCCACGGGCTTGTCCCGGCACAGCTGCGCGGCCAGGCCCAGCGCCGGCGTAGGAGGCAGCAGCTCCAGCCTAGG
CAGCGGCAGCAGGAAGCGACCTCTGCTCGCCCCCCTCTGCAACGGGCTCATCAACTCCTACGAGGACAAAAGCAACGACT
TCGTATGCCCCATCTGCTTTGATATGATTGAAGAAGCATACATGACAAAATGTGGCCACAGCTTTTGCTACAAGTGTATT
CATCAGAGTTTGGAGGACAATAATAGATGTCCCAAGTGTAACTATGTTGTGGACAATATTGACCATCTGTATCCTAATTT
CTTGGTGAATGAACTCATTCTTAAACAGAAGCAAAGATTTGAGGAAAAGAGGTTCAAATTGGACCACTCAGTGAGTAGCA
CCAATGGCCACAGGTGGCAGATATTTCAAGATTGGTTGGGAACTGACCAAGATAACCTTGATTTGGCCAATGTCAATCTT
ATGTTGGAGTTACTAGTGCAGAAGAAGAAACAACTGGAAGCAGAATCACATGCAGCCCAACTACAGATTCTTATGGAATT
CCTCAAGGTTGCAAGAAGAAATAAGAGAGAGCAACTGGAACAGATCCAGAAGGAGCTAAGTGTTTTGGAAGAGGATATTA
AGAGAGTGGAAGAAATGAGTGGCTTATACTCTCCTGTCAGTGAGGATAGCACAGTGCCTCAATTTGAAGCTCCTTCTCCA
TCACACAGTAGTATTATTGATTCCACAGAATACAGCCAACCTCCAGGTTTCAGTGGCAGTTCTCAGACAAAGAAACAGCC
TTGGTATAATAGCACATTAGCATCAAGACGAAAACGACTTACTGCTCATTTTGAAGACTTGGAGCAGTGTTACTTTTCTA
CAAGGATGTCTCGTATCTCAGATGACAGTCGAACTGCAAGCCAGTTGGATGAATTTCAGGAATGCTTGTCCAAGTTTACT
CGATATAATTCAGTACGACCTTTAGCCACATTGTCATACGCTAGTGATCTCTATAATGGTTCCAGTATAGTCTCTAGTAT
TGAATTTGACCGGGATTGTGACTATTTTGCGATTGCTGGAGTTACAAAGAAGATTAAAGTCTATGAATATGACACTGTCA
TCCAGGATGCAGTGGATATTCATTACCCTGAGAATGAAATGACCTGCAATTCGAAAATCAGCTGTATCAGTTGGAGTAGT
TACCATAAGAACCTGTTAGCTAGCAGTGATTATGAAGGCACTGTTATTTTATGGGATGGATTCACAGGACAGAGGTCAAA
GGTCTATCAGGAGCATGAGAAGAGGTGTTGGAGTGTTGACTTTAATTTGATGGATCCTAAACTCTTGGCTTCAGGTTCTG
ATGATGCAAAAGTGAAGCTGTGGTCTACCAATCTAGACAACTCAGTGGCAAGCATTGAGGCAAAGGCTAATGTGTGCTGT
GTTAAATTCAGCCCCTCTTCCCGATACCATTTGGCTTTCGGCTGTGCAGATCACTGTGTCCACTACTATGATCTTCGTAA
CACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTGAGTGGTGAGGAAATTG
TCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGTCATATC
AATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTA
CTATAAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTGGACAAAGACCGAAAAGAAG
ATGATACAAATGAATTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAAC
AGTCAGGGTACAATTAAGGTGCTAGAATTGGTATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 14 .44 RPM
SRP007412_cerebellum 13 .01 RPM
SRP007412_heart 8 .25 RPM
SRP007412_kidney 16 .48 RPM
SRP007412_liver 12 .37 RPM
SRP007412_testis 36 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000013437 ortholog_one2one 1 retrogene
retro_ggor_1366,
Macaca mulatta ENSMMUG00000002072 ortholog_one2one 1 retrogene
retro_mmul_1342,
Mus musculus ENSMUSG00000040782 ortholog_one2one 1 retrogene
retro_mmus_3678,
Nomascus leucogenys ENSNLEG00000015420 ortholog_one2one 1 retrogene
retro_nleu_1225,
Pan troglodytes ENSPTRG00000021702 within_species_paralog 5 retrogenes
retro_ptro_1802, retro_ptro_1909, retro_ptro_2226, retro_ptro_2987, retro_ptro_896,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1281 78.37 71.41
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Download FASTA sequences of all ENSPTRG00000001711 retrocopies