Parental gene: | APIP, ENSPTRG00000003499 |
| Aliases: | None |
| Description: | Methylthioribulose-1-phosphate dehydratase [Source:UniProtKB/TrEMBL;Acc:H2Q3E7] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 11:34867058..34902014(-) |
>ENSPTRG00000003499
ATGCGGCGCGCAGTGGCTTACATGGCTATCAAAATTGAAGCTCAGGGTCACCAGAGTTTTGCAATACCTTCAGGAACAGA
CAAGGAGCATCCAAGATACCTGATCCCAGAACTTTGCAAACAGTTTTACCATTTGGGCTGGGTCACTGGGACTGGAGGAG
GAATTAGCTTGAAGCATGGCGATGAAATCTACATTGCTCCTTCAGGAGTGCAAAAGGAACGAATTCAGCCTGAAGACATG
TTTGTTTGTGATATAAATGAAAAGGACATAAGTGGACCTTCGCCATCGAAGAAGCTAAAAAAAAGCCAGTGTACTCCTCT
TTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCAGTGATTCATACCCACTCTAAAGCTGCTGTGATGGCCACCCTTC
TCTTTCCAGGACGGGAATTTAAAATTACACATCAAGAGATGATAAAAGGAATAAAGAAATGTACTTCCGGAGGGTATTAT
AGATATGATGATATGTTAGTGGTACCCATTATTGAGAATACACCTGAGGAGAAAGACCTCAAAGATAGAATGGCTCATGC
AATGAATGAATACCCAGACTCCTGTGCAGTACTGGTCAGACGTCATGGAGTATATGTGTGGGGGGAAACATGGGAGAAGG
CCAAAACCATGTGTGAGTGTTATGACTATTTATTTGATATTGCCGTATCAATGAAGAAAGTAGGACTTGATCCTTCACAG
CTCCCAGTTGGAGAAAATGGAATTGTCTAA
ATGCGGCGCGCAGTGGCTTACATGGCTATCAAAATTGAAGCTCAGGGTCACCAGAGTTTTGCAATACCTTCAGGAACAGA
CAAGGAGCATCCAAGATACCTGATCCCAGAACTTTGCAAACAGTTTTACCATTTGGGCTGGGTCACTGGGACTGGAGGAG
GAATTAGCTTGAAGCATGGCGATGAAATCTACATTGCTCCTTCAGGAGTGCAAAAGGAACGAATTCAGCCTGAAGACATG
TTTGTTTGTGATATAAATGAAAAGGACATAAGTGGACCTTCGCCATCGAAGAAGCTAAAAAAAAGCCAGTGTACTCCTCT
TTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCAGTGATTCATACCCACTCTAAAGCTGCTGTGATGGCCACCCTTC
TCTTTCCAGGACGGGAATTTAAAATTACACATCAAGAGATGATAAAAGGAATAAAGAAATGTACTTCCGGAGGGTATTAT
AGATATGATGATATGTTAGTGGTACCCATTATTGAGAATACACCTGAGGAGAAAGACCTCAAAGATAGAATGGCTCATGC
AATGAATGAATACCCAGACTCCTGTGCAGTACTGGTCAGACGTCATGGAGTATATGTGTGGGGGGAAACATGGGAGAAGG
CCAAAACCATGTGTGAGTGTTATGACTATTTATTTGATATTGCCGTATCAATGAAGAAAGTAGGACTTGATCCTTCACAG
CTCCCAGTTGGAGAAAATGGAATTGTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .18 RPM |
| SRP007412_cerebellum | 5 .59 RPM |
| SRP007412_heart | 8 .98 RPM |
| SRP007412_kidney | 10 .75 RPM |
| SRP007412_liver | 8 .84 RPM |
| SRP007412_testis | 9 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000016758 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000149089 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022940 | ortholog_one2one | 2 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000007394 | ortholog_one2many | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000003361 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011523 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004390 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2856 | 95.45 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000003499 retrocopies