Parental gene: | INTS6, ENSPTRG00000005890 |
| Aliases: | None |
| Description: | integrator complex subunit 6 [Source:HGNC Symbol;Acc:14879] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 13:51096133..51182353(-) |
>ENSPTRG00000005890
ATGCCCATCTTACTGTTCCTGATAGACACGTCTGCCTCTATGAAACAGCGCAGCCATCTGGGCACCACCTACCTGGACAC
GGCCAANNNNNNNNNNTTTAAGACAGTGTTTCTTAAAANNNNNNNNNNTGCCAGCAGAGGGGACAGGTATATGCGGGTCA
CTTTCGAAGAGCCGCCTTATGCTATCGAGGCTGGATGGAAAGAAAACCATGCAACGTTTATGAATGAATTGAAAAACCTT
CAGGCTGAAGGACTTACGACTCTTGGCCAATCCCTAAGGACAGCTTTTGATTTATTAAATTTAAATAGATTAGTAACTGG
CATAGACAACTATGGGCAGGGAAGAAACCCTTTTTTCTTGGAGCCAGCAATAATTATCACAATTACTGATGGGAGCAAGT
TGACTACCACCAGTGGAGTCCAGGATGAGCTTCATTTACCTCTTAATTCTCCTTTGCCTGGAAGTGAATTGACCAAGGAA
CCTTTTCGTTGGGATCAGAGACTCTTTGCATTAGTGTTGCGGTTGCCTGGCACCATGTCAGTAGAATCAGAACAGTTGAC
AGGTGTGCCTTTAGATGACTCTGCAATCACACCAATGTGTGAAGTGACAGGCGGCCGTTCATATTCTGTGTGTTCTCCAA
GAATGCTTAATCAGTGTCTGGAGTCCTTGGTGCAGAAAGTACAAAGTGGGGTGGTAATAAACTTTGAAAAAGCAGGACCA
GATCCTTCCCCTGTAGAAGATGGGCAGCCAGATATATCAAGGCCTTTTGGATCTCAGCCTTGGCATAGCTGTCACAAACT
CATATATGTCAGACCAAATCCTAAAACTGGGGTTCCTATAGGTCATTGGCCTGTTCCAGAGTCTTTTTGGCCAGATCAAA
ATTCGCCAACACTACCACCTCGTACATCTCATCCTGTAGTGAAGTTTTCCTGTACAGACTGTGAACCAATGGTTATTGAT
AAACTTCCTTTTGACAAATATGAGTTGGAACCTTCACCACTGACTCAATTTATCCTGGAAAGGAAATCTCCTCAAACATG
TTGGCAGGTGTACGTGAGCAATAGTGCAAAATACAGTGAACTTGGTCATCCTTTTGGTTACTTGAAAGCCAGTACAGCAC
TGAACTGTGTCAACTTATTTGTGATGCCTTACAATTATCCAGTCCTTCTTCCCCTCTTAGATGACTTGTTTAAAGTGCAT
AAAGCAAAACCAACATTGAAGTGGAGACAGTCATTTGAAAGTTATTTGAAGACAATGCCTCCCTACTATCTTGGGCCCTT
GAAGAAAGCTGTTAGGATGATGGGAGCACCTAACCTAATAGCAGACAGTATGGAATATGGACTTAGTTACAGTGTCATTT
CATACCTCAAAAAACTGAGTCAACAGGCCAAAATAGAATCTGATCGAGTCATTGGATCTGTAGGCAAAAAAGTAGTACAG
GAGACTGGAATAAAAGTCCGGAGCCGATCACATGGTTTATCAATGGCATATAGGAAAGATTTTCAACAACTTCTCCAGGG
AATTTCAGAGGATGTCCCTCACAGACTGCTAGACCTTAATATGAAGGAATACACTGGGTTCCAAGTTGCTTTGCTGAATA
AGGATTTGAAGCAAAGGACATTTNGNNATGCTTATGACATACCAAGACGAAATCTTTTGGATCACTTAACAAGAATGAGA
TCTAATCTTTTGAAGAGCACTCGCAGATTTCTGAAAGGACAGGACGAAGATCAAGTGCACAGTGTTCCTATAGCACAAAT
GGGGAACTACCAGGAATACCTCAAGCAAGTACCTTCTCCACTAAGAGAACTTGATCCTGATCAGCCACGAAGGTTGCATA
CATTTGGCAACCCCTTTAAGCTGGATAAGAAGGGTATGATGATAGATGAAGCAGATGAATTTGTGGCTGGACCTCAAAAT
AAACATAAACGACCCGGAGAACCAAATATGCAAGGGATCCCTAAAAGACGTCGGTGTATGTCTCCACTACTAAGAGGCAG
ACAGCAGAATCCTGTTGTAAACAATCATATTGGGGGAAAAGGACCACCTGCACCTACAACTCAAGCACAGCCAGATCTTA
TTAAACCTCTTCCTCTTCATAAAATTTCAGAAACCACTAATGATTCGATAATACATGATGTGGTTGAAAATCATGTTGCA
GACCAACTTTCATCAGACATTACACCAAATGCTATGGATACGGAATTTTCAGCATCTTCTCCAGCCAGTTTACTGGAACG
GCCAACCAATCATACGGAGGCTCTTGGTCATGACCATTTAGGAACCAATGACCTCACTGTTGGTGGATTTTTAGAAAATC
ATGAGGAGCCAAGAGATAAAGAACAATGTGCTGAAGAGAACATACCAGCATCTTCACTCAACAAAGGAAAGAAATTGATG
CATTGCAGAAGCCATGAAGAGGTCAATACTGAACTAAAAGCACAGATAATGAAAGAGATCCGAAAGCCAGGAAGAAAATA
TGAAAGAATCTTCACTTTACTGAAGCATGTGCAAGGCAGTTTACAAACAAGACTAATATTTTTACAAAATGTCATTAAAG
AAGCATCAAGGTTTAAAAAACGAATGCTAATAGAACAACTGGAGAACTTCTTGGATGAAATTCATCGAAGAGCCAATCAG
ATCAACCATATTAATAGCAATTAA
ATGCCCATCTTACTGTTCCTGATAGACACGTCTGCCTCTATGAAACAGCGCAGCCATCTGGGCACCACCTACCTGGACAC
GGCCAANNNNNNNNNNTTTAAGACAGTGTTTCTTAAAANNNNNNNNNNTGCCAGCAGAGGGGACAGGTATATGCGGGTCA
CTTTCGAAGAGCCGCCTTATGCTATCGAGGCTGGATGGAAAGAAAACCATGCAACGTTTATGAATGAATTGAAAAACCTT
CAGGCTGAAGGACTTACGACTCTTGGCCAATCCCTAAGGACAGCTTTTGATTTATTAAATTTAAATAGATTAGTAACTGG
CATAGACAACTATGGGCAGGGAAGAAACCCTTTTTTCTTGGAGCCAGCAATAATTATCACAATTACTGATGGGAGCAAGT
TGACTACCACCAGTGGAGTCCAGGATGAGCTTCATTTACCTCTTAATTCTCCTTTGCCTGGAAGTGAATTGACCAAGGAA
CCTTTTCGTTGGGATCAGAGACTCTTTGCATTAGTGTTGCGGTTGCCTGGCACCATGTCAGTAGAATCAGAACAGTTGAC
AGGTGTGCCTTTAGATGACTCTGCAATCACACCAATGTGTGAAGTGACAGGCGGCCGTTCATATTCTGTGTGTTCTCCAA
GAATGCTTAATCAGTGTCTGGAGTCCTTGGTGCAGAAAGTACAAAGTGGGGTGGTAATAAACTTTGAAAAAGCAGGACCA
GATCCTTCCCCTGTAGAAGATGGGCAGCCAGATATATCAAGGCCTTTTGGATCTCAGCCTTGGCATAGCTGTCACAAACT
CATATATGTCAGACCAAATCCTAAAACTGGGGTTCCTATAGGTCATTGGCCTGTTCCAGAGTCTTTTTGGCCAGATCAAA
ATTCGCCAACACTACCACCTCGTACATCTCATCCTGTAGTGAAGTTTTCCTGTACAGACTGTGAACCAATGGTTATTGAT
AAACTTCCTTTTGACAAATATGAGTTGGAACCTTCACCACTGACTCAATTTATCCTGGAAAGGAAATCTCCTCAAACATG
TTGGCAGGTGTACGTGAGCAATAGTGCAAAATACAGTGAACTTGGTCATCCTTTTGGTTACTTGAAAGCCAGTACAGCAC
TGAACTGTGTCAACTTATTTGTGATGCCTTACAATTATCCAGTCCTTCTTCCCCTCTTAGATGACTTGTTTAAAGTGCAT
AAAGCAAAACCAACATTGAAGTGGAGACAGTCATTTGAAAGTTATTTGAAGACAATGCCTCCCTACTATCTTGGGCCCTT
GAAGAAAGCTGTTAGGATGATGGGAGCACCTAACCTAATAGCAGACAGTATGGAATATGGACTTAGTTACAGTGTCATTT
CATACCTCAAAAAACTGAGTCAACAGGCCAAAATAGAATCTGATCGAGTCATTGGATCTGTAGGCAAAAAAGTAGTACAG
GAGACTGGAATAAAAGTCCGGAGCCGATCACATGGTTTATCAATGGCATATAGGAAAGATTTTCAACAACTTCTCCAGGG
AATTTCAGAGGATGTCCCTCACAGACTGCTAGACCTTAATATGAAGGAATACACTGGGTTCCAAGTTGCTTTGCTGAATA
AGGATTTGAAGCAAAGGACATTTNGNNATGCTTATGACATACCAAGACGAAATCTTTTGGATCACTTAACAAGAATGAGA
TCTAATCTTTTGAAGAGCACTCGCAGATTTCTGAAAGGACAGGACGAAGATCAAGTGCACAGTGTTCCTATAGCACAAAT
GGGGAACTACCAGGAATACCTCAAGCAAGTACCTTCTCCACTAAGAGAACTTGATCCTGATCAGCCACGAAGGTTGCATA
CATTTGGCAACCCCTTTAAGCTGGATAAGAAGGGTATGATGATAGATGAAGCAGATGAATTTGTGGCTGGACCTCAAAAT
AAACATAAACGACCCGGAGAACCAAATATGCAAGGGATCCCTAAAAGACGTCGGTGTATGTCTCCACTACTAAGAGGCAG
ACAGCAGAATCCTGTTGTAAACAATCATATTGGGGGAAAAGGACCACCTGCACCTACAACTCAAGCACAGCCAGATCTTA
TTAAACCTCTTCCTCTTCATAAAATTTCAGAAACCACTAATGATTCGATAATACATGATGTGGTTGAAAATCATGTTGCA
GACCAACTTTCATCAGACATTACACCAAATGCTATGGATACGGAATTTTCAGCATCTTCTCCAGCCAGTTTACTGGAACG
GCCAACCAATCATACGGAGGCTCTTGGTCATGACCATTTAGGAACCAATGACCTCACTGTTGGTGGATTTTTAGAAAATC
ATGAGGAGCCAAGAGATAAAGAACAATGTGCTGAAGAGAACATACCAGCATCTTCACTCAACAAAGGAAAGAAATTGATG
CATTGCAGAAGCCATGAAGAGGTCAATACTGAACTAAAAGCACAGATAATGAAAGAGATCCGAAAGCCAGGAAGAAAATA
TGAAAGAATCTTCACTTTACTGAAGCATGTGCAAGGCAGTTTACAAACAAGACTAATATTTTTACAAAATGTCATTAAAG
AAGCATCAAGGTTTAAAAAACGAATGCTAATAGAACAACTGGAGAACTTCTTGGATGAAATTCATCGAAGAGCCAATCAG
ATCAACCATATTAATAGCAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 10 .92 RPM |
| SRP007412_cerebellum | 15 .70 RPM |
| SRP007412_heart | 14 .31 RPM |
| SRP007412_kidney | 16 .63 RPM |
| SRP007412_liver | 11 .98 RPM |
| SRP007412_testis | 150 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000102786 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001176 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005381 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000041730 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2164 | 91.13 | 64.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000005890 retrocopies