Parental gene: | G2E3, ENSPTRG00000006234 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 14:29431525..29495549(+) |
>ENSPTRG00000006234
ATGAATGAAAGTAAACCTGGTGACTCACAGAACCTTGCTTGTGTTTTCTGTCGAAAAAATGATGACTGTCCTAATAAATA
CGGAGAAAAGAAAACTAAGGAGAAATGGAATCTCACTGTACATTACTACTGTTTGTTGATGTCAAGTGGAATTTGGCAGA
GAGGCAAAGAAGAAGAAGGAGTTTATGGTTTTCTAATAGAAGATATCAGGAAGGAAGTGAATAGAGCTTCTAAACTGAAA
TGCTGTGTTTGCAAGAAAAATGGTGCTTCAATTGGATGTGTTGCACCCCGATGTAAACGAAGTTATCATTTCCCATGTGG
ACTTCAGAGAGAATGTATTTTCCAGTTTACTGGCAATTTTGCGTCATTTTGTTGGGACCATCGACCTGTTCAAATAATTA
CATCTAATAATTATAGAGAGTCCTTACCATGCACCATTTGCTTGGAATTTATTGAGCCTATTCCAAGTTATAACGTATTA
CGAAGTCCTTGTTGTAAGAACGCTTGGTTTCATAGAGACTGTTTACAGGTTCAAGCAATAAATGCGGGAGTGTTTTTCTT
TAGGTGTACAATATGCAATAATAGTGACATCTTTCAGAAAGAGATGTTGAGAATGGGAATTCATATTCCTGAAAAAGATG
CTTCCTGGGAATTAGAGGAAAACGCTTATCAAGAGCTTCTGCAGCACTATGAGCGTTGTGATGTTCGAAGATGTCGTTGC
AAAGAAGGGCGAGACTATAATGCACCTGATAGCAAATGGGAAATAAAGCGCTGTCACTGTTGTGGTTCCAGTGGCACACA
TTTAGCCTGCTCCTCATTACGGTCATGGGAGCAAAATTGGGAGTGTTTGGAATGTAGGGGTATTATCTACAATTCAGGAG
AGTTCCAAAAAGCCAAAAAACATGTATTACCCAACTCTAATAATGTGGGGATTACAGATTGTTTGTTGGAAGAGTCATCA
CCTAAATTACCCAGACAGTCACCTGGATCCCAGAGTAAAGATCTACTGAGGCAAGGCAGCAAATTTAGAAGAAATGTATC
AACACTATTAATAGAGTTAGGATTCCAAATTAAAAAAAAAACTAAAAGATTATATATCAACAAAGCCAATATCTGGAATA
GTGCCTTAGATGCATTCAGAAATCGAAACTTTAATCCTTCATATGCAATTGAAGTAGCATATGTTATTGAAAATGATAAT
TTTGGAAGTGAGCATCCTGGATCAAAGCAAGAATTTCTGAGTCTCTTAATGCAACATCTTGAGAACTCATCATTGTTTGA
AGGGTCCTTGTCAAAGAACTTGTCTCTAAATTCTCAAGCTCTGAAAGAGAATCTTTACTATGAAGCTGGCAAAATGCTTG
CCATTTCTTTAGTTCATGGTGGTCCTTCACCTGGTTTCTTTTCTAAAACCTTGTTTAACTGCCTTGTTTATGGACCAGAA
AATACCCAGCCAATTTTAGATGATGTTTCAGACTTTGATGTGGCACAGATTATAATCAGGATAAATACTGCAACAACTGT
AGCTGACTTAAAGTCAATAATAAATGAATGCTATAACTACCTTGAGTTAATTGGATGTCTCAGACTTATAACGACATTAA
GTGATAAATATATGTTAGTAAAAGACATACTTGGCTACCATGTAATTCAGAGAGTCCACACACCCTTTGAAAGTTTTAAG
CAGGGTCTGAAAACCCTTGGTGTTTTGGAGAAAATTCAGGCTTATCCAGAAGCATTTTGTAGCATCCTGTGTCATAAACC
TGAGAGTCTTTCTGCAAAAATCCTTAGTGAGCTTTTTACAGTACACACATTACCTGATGTAAAAGCTTTGGGGTTTTGGA
ACAGTTACTTACAGGCTGTTGAAGATGGTAAATCTACAACAACAATGGAAGACATTCTTATTTTTGCAACTGGTTGCAGT
TCCATTCCTCCAGCTGGATTTAAACCCACTCCTTCAATTGAGTGTCTGCATGTGGATTTTCCTGTTGGAAACAAGTGTAA
TAACTGTTTAGCAATTCCCATCACCAATACATATAAAGAGTTTCAAGAAAATATGGACTTCACCATAAGAAACACTCTAA
GACTAGAAAAGGAAGAAAGTTCTCATTACATTGGACATTAA
ATGAATGAAAGTAAACCTGGTGACTCACAGAACCTTGCTTGTGTTTTCTGTCGAAAAAATGATGACTGTCCTAATAAATA
CGGAGAAAAGAAAACTAAGGAGAAATGGAATCTCACTGTACATTACTACTGTTTGTTGATGTCAAGTGGAATTTGGCAGA
GAGGCAAAGAAGAAGAAGGAGTTTATGGTTTTCTAATAGAAGATATCAGGAAGGAAGTGAATAGAGCTTCTAAACTGAAA
TGCTGTGTTTGCAAGAAAAATGGTGCTTCAATTGGATGTGTTGCACCCCGATGTAAACGAAGTTATCATTTCCCATGTGG
ACTTCAGAGAGAATGTATTTTCCAGTTTACTGGCAATTTTGCGTCATTTTGTTGGGACCATCGACCTGTTCAAATAATTA
CATCTAATAATTATAGAGAGTCCTTACCATGCACCATTTGCTTGGAATTTATTGAGCCTATTCCAAGTTATAACGTATTA
CGAAGTCCTTGTTGTAAGAACGCTTGGTTTCATAGAGACTGTTTACAGGTTCAAGCAATAAATGCGGGAGTGTTTTTCTT
TAGGTGTACAATATGCAATAATAGTGACATCTTTCAGAAAGAGATGTTGAGAATGGGAATTCATATTCCTGAAAAAGATG
CTTCCTGGGAATTAGAGGAAAACGCTTATCAAGAGCTTCTGCAGCACTATGAGCGTTGTGATGTTCGAAGATGTCGTTGC
AAAGAAGGGCGAGACTATAATGCACCTGATAGCAAATGGGAAATAAAGCGCTGTCACTGTTGTGGTTCCAGTGGCACACA
TTTAGCCTGCTCCTCATTACGGTCATGGGAGCAAAATTGGGAGTGTTTGGAATGTAGGGGTATTATCTACAATTCAGGAG
AGTTCCAAAAAGCCAAAAAACATGTATTACCCAACTCTAATAATGTGGGGATTACAGATTGTTTGTTGGAAGAGTCATCA
CCTAAATTACCCAGACAGTCACCTGGATCCCAGAGTAAAGATCTACTGAGGCAAGGCAGCAAATTTAGAAGAAATGTATC
AACACTATTAATAGAGTTAGGATTCCAAATTAAAAAAAAAACTAAAAGATTATATATCAACAAAGCCAATATCTGGAATA
GTGCCTTAGATGCATTCAGAAATCGAAACTTTAATCCTTCATATGCAATTGAAGTAGCATATGTTATTGAAAATGATAAT
TTTGGAAGTGAGCATCCTGGATCAAAGCAAGAATTTCTGAGTCTCTTAATGCAACATCTTGAGAACTCATCATTGTTTGA
AGGGTCCTTGTCAAAGAACTTGTCTCTAAATTCTCAAGCTCTGAAAGAGAATCTTTACTATGAAGCTGGCAAAATGCTTG
CCATTTCTTTAGTTCATGGTGGTCCTTCACCTGGTTTCTTTTCTAAAACCTTGTTTAACTGCCTTGTTTATGGACCAGAA
AATACCCAGCCAATTTTAGATGATGTTTCAGACTTTGATGTGGCACAGATTATAATCAGGATAAATACTGCAACAACTGT
AGCTGACTTAAAGTCAATAATAAATGAATGCTATAACTACCTTGAGTTAATTGGATGTCTCAGACTTATAACGACATTAA
GTGATAAATATATGTTAGTAAAAGACATACTTGGCTACCATGTAATTCAGAGAGTCCACACACCCTTTGAAAGTTTTAAG
CAGGGTCTGAAAACCCTTGGTGTTTTGGAGAAAATTCAGGCTTATCCAGAAGCATTTTGTAGCATCCTGTGTCATAAACC
TGAGAGTCTTTCTGCAAAAATCCTTAGTGAGCTTTTTACAGTACACACATTACCTGATGTAAAAGCTTTGGGGTTTTGGA
ACAGTTACTTACAGGCTGTTGAAGATGGTAAATCTACAACAACAATGGAAGACATTCTTATTTTTGCAACTGGTTGCAGT
TCCATTCCTCCAGCTGGATTTAAACCCACTCCTTCAATTGAGTGTCTGCATGTGGATTTTCCTGTTGGAAACAAGTGTAA
TAACTGTTTAGCAATTCCCATCACCAATACATATAAAGAGTTTCAAGAAAATATGGACTTCACCATAAGAAACACTCTAA
GACTAGAAAAGGAAGAAAGTTCTCATTACATTGGACATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 6 .92 RPM |
| SRP007412_cerebellum | 12 .87 RPM |
| SRP007412_heart | 4 .37 RPM |
| SRP007412_kidney | 7 .22 RPM |
| SRP007412_liver | 3 .14 RPM |
| SRP007412_testis | 114 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000002109 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000092140 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005719 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1827 | 88.55 | 70.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000006234 retrocopies