Parental gene: | ENSPTRG00000008496 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 16:89661830..89672428(+) |
>ENSPTRG00000008496
ATGAGGGAGATCGTGCACATCCAGGCCGGCCAGTGCGGCAACCAGATCGGGGCCAAGTTCTGGGAAGTCATCAGTGATGA
GCATGGCATCGACCCCAGCGGCAACTACGTGGGCGACTCGGACTTGCAGCTGGAGCGGATCAGCGTCTACTACAACGAGG
CCTCTTCTCACAAGTACGTGCCTCGAGCCATTCTGGTGGACCTGGAACCCGGAACCATGGACAGTGTCCGCTCAGGGGCC
TTTGGACATCTCTTCAGGCCTGACAATTTCATCTTTGGTCAGAGTGGGGCCGGCAACAACTGGGCCAAGGGTCACTACAC
GGAGGGGGCGGAGCTGGTGGATTCGGTCCTGGATGTCGTGCGGAAGGAGTGTGAAAACTGCGACTGCCTGCAGGGCTTCC
AGCTGACCCACTCGCTGGGGGGCGGCACGGGCTCCGGCATGGGCACGCTGCTCATCAGCAAGGTGCGTGAGGAGTATCCC
GACCGCATCATGAACACCTTCAGCGTCGTGCCCTCGCCCAAGGTGTCAGACACGGTGGTGGAGCCCTACAACGCCACGCT
GTCCATCCACCAGCTGGTGGAGAACACGGATGAGACCTACTGCATCGACAACGAGGCGCTCTACGACATCTGCTTCCGCA
CCCTCAAGCTGGCCACGCCCACCTACGGGGACCTCAACCACCTGGTGTCGGCCACCATGAGCGGAGTCACCACCTCCTTG
CGCTTCCCGGGCCAGCTCAACGCTGACCTGCGCAAGCTGGCCGTCAACATGGTGCCCTTCCCGCGCCTGCACTTCTTCAT
GCCCGGCTTCGCCCCCCTCACAGCCCGGGGCAGCCAGCAGTACCGGGCCCTGACCGTGCCCGAGCTCACCCAGCAGATGT
TCGATGCCAAGAACATGATGGCTGCCTGCGACCCACGCCACGGCCGCTACCTGACGGTGGCCACCGTGTTCCGGGGCCGC
ATGTCCATGAAGGAGGTGGACGAGCAGATGCTGGCCATCCAGAGCAAGAACAGCAGCTACTTCGTGGAGTGGATCCCCAA
CAACGTGAAGGTGGCCGTGTGTGACATCCCGCCCCGCGGCCTCAAGATGTCCTCCACCTTCATCGGCAACAGCACGGCCA
TCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTACACGGGC
GAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAATGACCTGGTGTCTGAGTACCAGCAGTACCAGGA
CGCCACGGCCGAGGAGGAGGGCGAGACGTACGAAGACGACGAGGAGGAGTCGGAGGCCCAGGGCCCCAAGTGA
ATGAGGGAGATCGTGCACATCCAGGCCGGCCAGTGCGGCAACCAGATCGGGGCCAAGTTCTGGGAAGTCATCAGTGATGA
GCATGGCATCGACCCCAGCGGCAACTACGTGGGCGACTCGGACTTGCAGCTGGAGCGGATCAGCGTCTACTACAACGAGG
CCTCTTCTCACAAGTACGTGCCTCGAGCCATTCTGGTGGACCTGGAACCCGGAACCATGGACAGTGTCCGCTCAGGGGCC
TTTGGACATCTCTTCAGGCCTGACAATTTCATCTTTGGTCAGAGTGGGGCCGGCAACAACTGGGCCAAGGGTCACTACAC
GGAGGGGGCGGAGCTGGTGGATTCGGTCCTGGATGTCGTGCGGAAGGAGTGTGAAAACTGCGACTGCCTGCAGGGCTTCC
AGCTGACCCACTCGCTGGGGGGCGGCACGGGCTCCGGCATGGGCACGCTGCTCATCAGCAAGGTGCGTGAGGAGTATCCC
GACCGCATCATGAACACCTTCAGCGTCGTGCCCTCGCCCAAGGTGTCAGACACGGTGGTGGAGCCCTACAACGCCACGCT
GTCCATCCACCAGCTGGTGGAGAACACGGATGAGACCTACTGCATCGACAACGAGGCGCTCTACGACATCTGCTTCCGCA
CCCTCAAGCTGGCCACGCCCACCTACGGGGACCTCAACCACCTGGTGTCGGCCACCATGAGCGGAGTCACCACCTCCTTG
CGCTTCCCGGGCCAGCTCAACGCTGACCTGCGCAAGCTGGCCGTCAACATGGTGCCCTTCCCGCGCCTGCACTTCTTCAT
GCCCGGCTTCGCCCCCCTCACAGCCCGGGGCAGCCAGCAGTACCGGGCCCTGACCGTGCCCGAGCTCACCCAGCAGATGT
TCGATGCCAAGAACATGATGGCTGCCTGCGACCCACGCCACGGCCGCTACCTGACGGTGGCCACCGTGTTCCGGGGCCGC
ATGTCCATGAAGGAGGTGGACGAGCAGATGCTGGCCATCCAGAGCAAGAACAGCAGCTACTTCGTGGAGTGGATCCCCAA
CAACGTGAAGGTGGCCGTGTGTGACATCCCGCCCCGCGGCCTCAAGATGTCCTCCACCTTCATCGGCAACAGCACGGCCA
TCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTACACGGGC
GAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAATGACCTGGTGTCTGAGTACCAGCAGTACCAGGA
CGCCACGGCCGAGGAGGAGGGCGAGACGTACGAAGACGACGAGGAGGAGTCGGAGGCCCAGGGCCCCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 261 .66 RPM |
| SRP007412_cerebellum | 115 .83 RPM |
| SRP007412_heart | 0 .03 RPM |
| SRP007412_kidney | 0 .31 RPM |
| SRP007412_liver | 0 .07 RPM |
| SRP007412_testis | 19 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pan troglodytes | ENSPTRG00000017939 | within_species_paralog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000023373 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2369 | 78.99 | 60.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008496 retrocopies