Parental gene: | PTGES3L-AARSD1, ENSPTRG00000009230 |
| Aliases: | None |
| Description: | PTGES3L-AARSD1 readthrough [Source:UniProtKB/TrEMBL;Acc:K7CD23] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:14404702..14427357(+) |
>ENSPTRG00000009230
ATGTTCTCTCTTCCTCTCAACTGTTCTCCCGACCATATAAGGAGAGGCAGCTGCTGGGGGCGTCCCCAGGATCTAAAGAT
AGCGGCCCCTGCCTGGAACTCTAAATGCCACCCTGGAGCGGGAGCCGCAATGGCACGGCAGCACGCCCGGACCTTGTGGT
ACGACAGGCCCAGGTATGTGTTCATGGAGTTTTGTGTTGAGGACAGCACCGATGTCCACGTGCTTATTGAGGATCACCGC
ATTGTGTTCAGCTGCAAGAATGCCGATGGAGTGGAGTTGTACAATGAGATTGAGTTCTATGCCAAAGTGAACTCCAAGGA
CTCCCAGGATAAGCGCTCTTCCCGCTCTATTACTTGTTTTGTGAGAAAATGGAAGGAAAAGGTGGCCTGGCCGCGGCTTA
CCAAGGAGGATATCAAGCCAGTGTGGCTGTCTGTGGACTTTGATAACTGGAGAGACTGGGAAGGGGATGAAGAGATGGAG
CTGGCTCATGTGGAACATTATGCAGAGCTTTTGAAGAAGGTCAGCACCAAGAGACCTCCACCTGCCATGGATGATTTGGA
TTTCACCACCACCGTGGTCTCCTGCTGTCCCGCGGAGCTGCAGACTGAAGGGAGCAACGGCAAGAAAGAAGTGCTGAGCG
GTTTCCAAGTGGTGCTGGAAGACACAGTGCTTTTCCCTGAGGGCGGGGGACAGCCTGATGACCGTGGTACAATCAATGAC
ATCTCTGTGCTGAGAGTGACTCGCCGTGGGGAACAGGCTGATCATTTCACCCAGACACCCCTGGATCCAGGAAGCCAGGT
TCTGGTCCGGGTAGATTGGGAGCGGAGGTTTGACCACATGCAGCAGCATTCAGGGCAGCATCTCATCACGGCAGTTGCTG
ACCATCTATTTAAGCTGAAGACAACATCATGGGAGTTAGGGAGATTTCGGAGTGCGATTGAGCTGGACACCCCCTCTATG
ACTGCAGAGCAAGTAGCTGCCATTGAGCAGAGCGTCAATGAAAAAATCAGAGATCGGCTGCCTGTGAATGTCCGAGAACT
GAGCCTGGATGATCCTGAGGTGGAGCAGGTGAGTGGCCGGGGTTTGCCTGATGATCATGCTGGGCCCATTCGGGTTGTTA
GCATCGAGGGCGTTGATTCCAACATGTGCTGTGGGACCCATGTGAGCAATCTCAGTGACCTTCAGGTCATTAAGATTCTG
GGCACTGAGAAGGGGAAAAAGAACAGAACCAACCTGATATTTCTGGCTGGGAACCGGGTGCTGAAGTGGATGGAGAGAAG
TCATGGAACTGAAAAAGCACTGACTGCTCTGCTTAAGTGTGGAGCAGAGGATCATGTGGAAGCAGTGAAAAAGCTCCAGA
ACTCCACCAAGATCCTGCAGAAG
ATGTTCTCTCTTCCTCTCAACTGTTCTCCCGACCATATAAGGAGAGGCAGCTGCTGGGGGCGTCCCCAGGATCTAAAGAT
AGCGGCCCCTGCCTGGAACTCTAAATGCCACCCTGGAGCGGGAGCCGCAATGGCACGGCAGCACGCCCGGACCTTGTGGT
ACGACAGGCCCAGGTATGTGTTCATGGAGTTTTGTGTTGAGGACAGCACCGATGTCCACGTGCTTATTGAGGATCACCGC
ATTGTGTTCAGCTGCAAGAATGCCGATGGAGTGGAGTTGTACAATGAGATTGAGTTCTATGCCAAAGTGAACTCCAAGGA
CTCCCAGGATAAGCGCTCTTCCCGCTCTATTACTTGTTTTGTGAGAAAATGGAAGGAAAAGGTGGCCTGGCCGCGGCTTA
CCAAGGAGGATATCAAGCCAGTGTGGCTGTCTGTGGACTTTGATAACTGGAGAGACTGGGAAGGGGATGAAGAGATGGAG
CTGGCTCATGTGGAACATTATGCAGAGCTTTTGAAGAAGGTCAGCACCAAGAGACCTCCACCTGCCATGGATGATTTGGA
TTTCACCACCACCGTGGTCTCCTGCTGTCCCGCGGAGCTGCAGACTGAAGGGAGCAACGGCAAGAAAGAAGTGCTGAGCG
GTTTCCAAGTGGTGCTGGAAGACACAGTGCTTTTCCCTGAGGGCGGGGGACAGCCTGATGACCGTGGTACAATCAATGAC
ATCTCTGTGCTGAGAGTGACTCGCCGTGGGGAACAGGCTGATCATTTCACCCAGACACCCCTGGATCCAGGAAGCCAGGT
TCTGGTCCGGGTAGATTGGGAGCGGAGGTTTGACCACATGCAGCAGCATTCAGGGCAGCATCTCATCACGGCAGTTGCTG
ACCATCTATTTAAGCTGAAGACAACATCATGGGAGTTAGGGAGATTTCGGAGTGCGATTGAGCTGGACACCCCCTCTATG
ACTGCAGAGCAAGTAGCTGCCATTGAGCAGAGCGTCAATGAAAAAATCAGAGATCGGCTGCCTGTGAATGTCCGAGAACT
GAGCCTGGATGATCCTGAGGTGGAGCAGGTGAGTGGCCGGGGTTTGCCTGATGATCATGCTGGGCCCATTCGGGTTGTTA
GCATCGAGGGCGTTGATTCCAACATGTGCTGTGGGACCCATGTGAGCAATCTCAGTGACCTTCAGGTCATTAAGATTCTG
GGCACTGAGAAGGGGAAAAAGAACAGAACCAACCTGATATTTCTGGCTGGGAACCGGGTGCTGAAGTGGATGGAGAGAAG
TCATGGAACTGAAAAAGCACTGACTGCTCTGCTTAAGTGTGGAGCAGAGGATCATGTGGAAGCAGTGAAAAAGCTCCAGA
ACTCCACCAAGATCCTGCAGAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .18 RPM |
| SRP007412_cerebellum | 29 .86 RPM |
| SRP007412_heart | 23 .93 RPM |
| SRP007412_kidney | 15 .35 RPM |
| SRP007412_liver | 17 .38 RPM |
| SRP007412_testis | 42 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000266967 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005108 | within_species_paralog | 8 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_3129 | 71.00 | 57.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009230 retrocopies