Parental gene: | SSBP4, ENSPTRG00000010709 |
| Aliases: | None |
| Description: | single stranded DNA binding protein 4 [Source:HGNC Symbol;Acc:15676] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:18718912..18735077(+) |
>ENSPTRG00000010709
GAGGGGCGCACGTTGGCGCTGTACGTTTATGAGTACCTGCTGCACATCGGTGCCCAGAAGTCAGCCCAGACCTTCCTGTT
TGAGATCCGATGGGAGAAGAACATCACGCTGGGGGAGCCCCCTGGGTTCCTGCACTCCTGGTGGTGCGTCTTCTGGGACC
TGTACTGCGCGGCGCCTGACCGAAGAGAGGCCTGCGAGCACTCCGGCGAGGCCAAGGCCTTCCAGGATTATAGTGCTGCA
GCCGCCCCCAGCCCTGTTATGGGGAGTATGGCCCCAGGTGACACAATGGCCGCAGGCCCCATGGCGGCTGGCTTCTTCCA
GGGCCCCCCCGGCTCCCAGCCGTCCCCCCACAACCCCAACGCCCCCATGATGGGGCCTCACGGTCAGCCCTTCATGTCAC
CGCGCTTCCCAGGGGGCCCCCGGCCCACCCTGCGGATGCCGAGTCAGCCTCCCGCAGGCCTCCCTGGCTCCCAGCCCCTC
CTCCCTGGCGCCATGGAGCCCTCCCCACGAGCCCAGGGGCATCCAAGCATGGGCGGCCCAATGCAGAGGGTGACGCCTCC
TCGTGGCATGGCCAGCGTGGGGCCCCAGAGCTATGGAGGTGGCATGCGACCCCCACCCAACTCCCTCGCCGGCCCAGGCC
TGCCTGCCATGAACATGGGCCCAGGAGTTCGTGGCCCGTGGGCCAGCCCCAGTGGAAACTCGATCCCCTACTCCTCCTCA
TCTCCCGGCAGCTACACGGGACCCCCAGGAGGAGGTGGGCCCCCTGGAACACCCATCATGCCTAGCCCTGGAGATTCCAC
CAACTCCAGCGAAAACATGTACACTATCATGAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATTTCCCGCTTGGCCCTG
GCCCGGAGGGCCCCATGGCCGCCATGAGCGCGATGGAGCCTCACCACGTGAACGGATCCCTGTACTCGCCAGGGATGACC
ATGAGCGTGTGA
GAGGGGCGCACGTTGGCGCTGTACGTTTATGAGTACCTGCTGCACATCGGTGCCCAGAAGTCAGCCCAGACCTTCCTGTT
TGAGATCCGATGGGAGAAGAACATCACGCTGGGGGAGCCCCCTGGGTTCCTGCACTCCTGGTGGTGCGTCTTCTGGGACC
TGTACTGCGCGGCGCCTGACCGAAGAGAGGCCTGCGAGCACTCCGGCGAGGCCAAGGCCTTCCAGGATTATAGTGCTGCA
GCCGCCCCCAGCCCTGTTATGGGGAGTATGGCCCCAGGTGACACAATGGCCGCAGGCCCCATGGCGGCTGGCTTCTTCCA
GGGCCCCCCCGGCTCCCAGCCGTCCCCCCACAACCCCAACGCCCCCATGATGGGGCCTCACGGTCAGCCCTTCATGTCAC
CGCGCTTCCCAGGGGGCCCCCGGCCCACCCTGCGGATGCCGAGTCAGCCTCCCGCAGGCCTCCCTGGCTCCCAGCCCCTC
CTCCCTGGCGCCATGGAGCCCTCCCCACGAGCCCAGGGGCATCCAAGCATGGGCGGCCCAATGCAGAGGGTGACGCCTCC
TCGTGGCATGGCCAGCGTGGGGCCCCAGAGCTATGGAGGTGGCATGCGACCCCCACCCAACTCCCTCGCCGGCCCAGGCC
TGCCTGCCATGAACATGGGCCCAGGAGTTCGTGGCCCGTGGGCCAGCCCCAGTGGAAACTCGATCCCCTACTCCTCCTCA
TCTCCCGGCAGCTACACGGGACCCCCAGGAGGAGGTGGGCCCCCTGGAACACCCATCATGCCTAGCCCTGGAGATTCCAC
CAACTCCAGCGAAAACATGTACACTATCATGAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATTTCCCGCTTGGCCCTG
GCCCGGAGGGCCCCATGGCCGCCATGAGCGCGATGGAGCCTCACCACGTGAACGGATCCCTGTACTCGCCAGGGATGACC
ATGAGCGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 41 .04 RPM |
| SRP007412_cerebellum | 10 .75 RPM |
| SRP007412_heart | 1 .57 RPM |
| SRP007412_kidney | 7 .64 RPM |
| SRP007412_liver | 9 .82 RPM |
| SRP007412_testis | 1 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000130511 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000016931 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000770 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1250 | 86.75 | 72.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1640 | 62.74 | 64.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000010709 retrocopies