Parental gene: | MTA3, ENSPTRG00000011867 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 2A:43250853..43386854(+) |
>ENSPTRG00000011867
ATGGCGGCCAACATGTACCGGGTCGGAGATTATGTCTACTTTGAGAATTCTTCCAGCAACCCATACCTAATAAGAAGGAT
AGAAGAACTCAACAAGACTGCAAGTGGCAACGTGGAAGCAAAAGTAGTATGCTTTTATAGACGACGTGATATTTCCAACA
CACTTATAATGCTCGCAGATAAGCATGCTAAAGAAATTGAGGAAGAATCTGAAACAACAGTTGAGGCTGACTTGACCGAT
AAGCAGAAACATCAGTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACATATCAGGGG
AAAGTGCAGTGTTGCCCTTCTGAATGAGACAGAATCAGTATTGTCATATCTTGATAAGGAGGATACCTTCTTCTACTCAT
TGGTCTATGACCCCTCATTGAAAACACTATTAGCTGACAAAGGTGAAATCAGAGTGGGACCTAGATATCAAGCAGACATT
CCAGAAATGCTGTTAGAAGGAGAATCAGATGAGAGGGAACAATCAAAATTGGAAGTTAAAGTTTGGGATCCAAATAGCCC
ACTTACGGATCGACAGATTGACCAGTTTTTAGTTGTAGCACGTGCTGTTGGGACATTCGCCAGAGCCCTGGATTGCAGCA
GTTCTGTGAGGCAGCCTAGTTTGCATATGAGTGCTGCTGCAGCTTCCCGAGACATCACCTTGTTTCACGCTATGGATACA
TTGTATAGACACAGCTATGATTTGAGCAGTGCCATTAGTGTCTTAGTACCACTCGGAGGACCTGTTTTATGCAGAGATGA
AATGGAGGAATGGTCAGCCTCTGAAGCTAGCTTATTTGAAGAGGCACTGGAAAAATATGGCAAAGACTTCAATGACATAC
GGCAAGATTTTCTTCCTTGGAAATCATTGACTAGCATCATTGAATATTATTACATGTGGAAAACTACTGACAGATATGTG
CAACAGAAACGTCTAAAAGCAGCAGAAGCTGAGAGTAAACTGAAACAAGTATATATCCCAACTTACAGCAAACCAAATCC
CAACCAAATATCCACTAGTAATGGGAAGCCTGGTGCTGTGAATGGAGCTGTGGGGACCACGTTCCAGCCTCAGAATCCTC
TCTTAGGGAGAGCCTGTGAGAGCTGCTATGCTACACAGTCTCACCAGTGGTATTCTTGGGGCCCACCTAATATGCAGTGT
AGATTATGTGCAATTTGTTGGCTTTATTGGAAAAAATATGGAGGCTTGAAAATGCCCACCCAGTCAGAAGAAGAGAAGTT
ATCTCCTAGCCCAACTACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTGCGAA
ACACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAAGCTTTCTTCCTTCATACTACATATTTCACAAAATTTGCTCGT
CAGGTCTGCAAAAATACCCTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTTGCTATTAATTATGCTGCCATTAGGGC
AGAATGTAAGATGCTTTTAAATTCTTAA
ATGGCGGCCAACATGTACCGGGTCGGAGATTATGTCTACTTTGAGAATTCTTCCAGCAACCCATACCTAATAAGAAGGAT
AGAAGAACTCAACAAGACTGCAAGTGGCAACGTGGAAGCAAAAGTAGTATGCTTTTATAGACGACGTGATATTTCCAACA
CACTTATAATGCTCGCAGATAAGCATGCTAAAGAAATTGAGGAAGAATCTGAAACAACAGTTGAGGCTGACTTGACCGAT
AAGCAGAAACATCAGTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACATATCAGGGG
AAAGTGCAGTGTTGCCCTTCTGAATGAGACAGAATCAGTATTGTCATATCTTGATAAGGAGGATACCTTCTTCTACTCAT
TGGTCTATGACCCCTCATTGAAAACACTATTAGCTGACAAAGGTGAAATCAGAGTGGGACCTAGATATCAAGCAGACATT
CCAGAAATGCTGTTAGAAGGAGAATCAGATGAGAGGGAACAATCAAAATTGGAAGTTAAAGTTTGGGATCCAAATAGCCC
ACTTACGGATCGACAGATTGACCAGTTTTTAGTTGTAGCACGTGCTGTTGGGACATTCGCCAGAGCCCTGGATTGCAGCA
GTTCTGTGAGGCAGCCTAGTTTGCATATGAGTGCTGCTGCAGCTTCCCGAGACATCACCTTGTTTCACGCTATGGATACA
TTGTATAGACACAGCTATGATTTGAGCAGTGCCATTAGTGTCTTAGTACCACTCGGAGGACCTGTTTTATGCAGAGATGA
AATGGAGGAATGGTCAGCCTCTGAAGCTAGCTTATTTGAAGAGGCACTGGAAAAATATGGCAAAGACTTCAATGACATAC
GGCAAGATTTTCTTCCTTGGAAATCATTGACTAGCATCATTGAATATTATTACATGTGGAAAACTACTGACAGATATGTG
CAACAGAAACGTCTAAAAGCAGCAGAAGCTGAGAGTAAACTGAAACAAGTATATATCCCAACTTACAGCAAACCAAATCC
CAACCAAATATCCACTAGTAATGGGAAGCCTGGTGCTGTGAATGGAGCTGTGGGGACCACGTTCCAGCCTCAGAATCCTC
TCTTAGGGAGAGCCTGTGAGAGCTGCTATGCTACACAGTCTCACCAGTGGTATTCTTGGGGCCCACCTAATATGCAGTGT
AGATTATGTGCAATTTGTTGGCTTTATTGGAAAAAATATGGAGGCTTGAAAATGCCCACCCAGTCAGAAGAAGAGAAGTT
ATCTCCTAGCCCAACTACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTGCGAA
ACACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAAGCTTTCTTCCTTCATACTACATATTTCACAAAATTTGCTCGT
CAGGTCTGCAAAAATACCCTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTTGCTATTAATTATGCTGCCATTAGGGC
AGAATGTAAGATGCTTTTAAATTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .24 RPM |
| SRP007412_cerebellum | 12 .37 RPM |
| SRP007412_heart | 9 .44 RPM |
| SRP007412_kidney | 15 .59 RPM |
| SRP007412_liver | 5 .56 RPM |
| SRP007412_testis | 52 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014614 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000057935 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006895 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016680 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1708 | 74.22 | 79.81 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000011867 retrocopies